Detailed information of KAL9972833.1 in Oculina patagonica

Genomic Location: chr5:17745302...17784962
NR annotation: PAA53525.1, hypothetical protein BOX15_Mlig001877g1 [Macrostomum lignano]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP