Gene detail

Detailed information of KAL9973289.1 in Oculina patagonica

Genomic Location: chr5:24325494...24354173
NR annotation: XP_020602944.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O96530	Hyalin (Fragment) OS=Lytechinus variegatus OX=7654 PE=2 SV=1
Q8R054	Sushi repeat-containing protein SRPX2 OS=Mus musculus OX=10090 GN=Srpx2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF02494	HYR	HYR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR043555	Family	Sushi repeat-containing protein SRPX-like	Interproscan
IPR003410	Domain	HYR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46343	HYR DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan