Gene detail

Detailed information of KAL9974051.1 in Oculina patagonica

Genomic Location: chr4:1...12553
NR annotation: KAJ7374620.1, hypothetical protein OS493_004959 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G011041

ATGTTCTATCTTAAATATCTTGACCTTTCGAGAAACCGGATTTCTTTCATTGAGCGACACTATTTTTACAGCCTTTACGAATTATCTTTCTTGAACCTAGCATACAATCCTTTGCGGGAAGTAGAAGAAAGAGCTTTCTTCAACACACCGAAACTGAAGTATCTGAATTTAATGTTCAACTCTATGGATGTACTCCAGCCTTATCATCTCTCAGGGCCACGTGACCTGGTGGTAGAGTTGGAACCTGCCAAGGAGGTTGTTAACTATCATCTGCCAATCAGCGTCAATCTTGCCTACATGCGCAAGTCATCCGGGTACCAATGTAACAACTATGGAAACGGGAGTGAATTGTGTCGTCCTTGTCCACTCGGAACTTATAGCGGAATGCAAGAGGACTGTACTGCTTGTCCTCCAGGTGGTTTTTATCAAGATGAGTTTGCCTACACTGGAAGACTTTCCCATGGCATGGGATGTAAACTCTGCCCGTTAGGTCATTTTGTACCACCGCATGCTGCCCCAGGCAAAGCCATCACAGAATGCATCTTATGTCCACAAGGAACCGAATATGCCCGGTTTGCCGGCTTTAAAGGGTGCGAGTGTCTCTCGAGTTTTTATCGATTGGATCGATTTGGCCCATGTGTAAGATGTCCTTTACAAGGACTAACCTGCCAAAACGAGTCGGTAAGACTTCAGCCAGGTTTCTTCTGGAAATGGCTATCAAATGAAAGTCTTATGAAATACGAAGAATTTTCAGCAGATCTTTTAATCACCGACAACTCATACCAACAGCTCAGATTTCAAGGAACAATTCCACTCGTCTACAAATGCCCGGCACCTGAGGCGTGTCTCGGAGGCATGAGGTCAATGTGTTCCCATGGTTACGGTGGACCCTTATGCGCAGTGTGCAGCAAAGGACATTACCAACTGCTAAACCGTTGTCGCAAATGTCCCAGGATGCTTTGGTTCGTTTTACAAGTATGTGGAATTGTCATTCTCGTCGTTATTCTAACGGTAAGCATCTTTCTGGGCAAGAAAAGAAAATGCGCATCTAATAGGACGGTGACTGACATGATACTAGCTCGACTTAAGATTGTCATTGGCTTTTACCAAGTTACTTCAGGGACATTGAACACATTTTCGTACGTGGAATGGCCTAGTGCGTTATTGACAGTAGTGCATTTTGCCAACATGGTGCAACTAAACCTGTTGGAGATTGTTCCTTTGCAGTGCTTTGACGACAATCTTACGGTAAATGTCTACACGAGGTTATTGCTTGTTGTGGGGTCAAATACTGCAATCATCTTCCTAGCAGCGTTTATTTACCAGATAAGGAAACTCGTGCTTATCAACACTAAGAAGCTTGCTGGTCCTGAATTGGCCGAGTCTCTTTCCTCCGATAAAACACAAATCTATCGCGTCGTCTCCCTCCTAATCTTTGTGACATACCCTTGGACATGCACAACCATCTTCAGCCTCCTGTCGCCAACATGTCAGCAGATCTGCTCCAACGCCGACTCGTGCCAGTACTTCTTGCGCGCTGACTTCTCAGTCCAGTGCTTCACTGACAAGTACAACAAATATGTGATTGCTGTTTACTTCCTTCTCATCCTTGTCGTTGCCATACCAATCATAGTCCTCTTTTTGCTATGGAAGTACCACCACAGAAAGATTTATGAAGAAGCCGAAGCCCAGAATAATAAGGGTAGGGAAATAGCCAATGGTTTGAGCTTCCTCTATGAAAACTACGCTCGACAGTGCTGGTTCTGGGAAATTATCGAGTTGGCTAGGAAAGTGTGGGTGACGTCGACGCTCTTTCTTATGGGGGCAGACACTCGAAGCCATCTCGGTACAGCCGCCATAATATCCGGGATCTACACCATTTTGGTGGCATATTACAAGCCAATCCGAGACACGTTTGAACACTGGCTGCAGCTGGTGTCACTTGTTGCCAACTTTATCACAATGAACGTTGGAATGCTGTTGAAAATACCAACGGAAGAGGATTCCTCGGGTAGCTTTGGAGAAAGGGACTCTGCTTTTGTTTCCGCCATTCTGGTGGCTGTAAATGTCACTGTTGTAGCGTTAATGGCGGTGCATTACATGTACACTTTCATCACTGCGGTTAAACACCTGAGAAGTAAGCCAAAGTGCGGAGCCGAGTGTTGTGTGACATTCTTGATGATAATGGTTGGAGCGGGAGAGGATGCTACAGACATTGACAGTGGAGGGATTCGAACCTCAGCTGTGTCACACGATATTAACTAA

Transcript

rna-ACROYT_G011041.t0

tagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtgaaGTAATAGTATATAAAGAATTGAATGAATACTTATTTgtactgttttgttttcttagaaaattaGGATATAACCAGATCTCTGAAGTGCCTTCTCGTGCATTCATTCATGTCCAATACCTTGGATACTTGTATGTAGATAAACCTTATTATATGACATAAAACGCAGGGAGACGATATTCCTGTTACTTTAACGCAAGAATGATTATTAAGATATAAACCTACTCCAGTAGTGGGAGGAGTGGATTTTAATAACTAAACTTCTTCTATCAGTTCCTTTTCAGTCGGTTTAAGAGCATAATTTTTTCGAATACTGATGTGATGTATTGATGATGAACATTTAGGGACCTATCTAACAACAGGATTAAGATCATTCAGCCGGCAGCATTCAGGGGTCTTTTCCTAGTTGCTGTTCTattacTTGAAAGCAACGAAATTTCTTCGTTGGCAAATGGAACGCTTACAAGCATGTTCTATCTTAAATATCTTGACCTTTCGAGAAACCGGATTTCTTTCATTGAGCGACACTATTTTTACAGCCTTTACGAATTATCTTTCTTGAACCTAGCATACAATCCTTTGCGGGAAGTAGAAGAAAGAGCTTTCTTCAACACACCGAAACTGAAGTATCTGAATTTAATGTTCAACTCTATGGATGTACTCCAGCCTTATCATCTCTCAGGGCCACGTGACCTGGTGGTAGAGTTGGAACCTGCCAAGGAGGTTGTTAACTATCATCTGCCAATCAGCGTCAATCTTGCCTACATGCGCAAGTCATCCGGGTACCAATGTAACAACTATGGAAACGGGAGTGAATTGTGTCGTCCTTGTCCACTCGGAACTTATAGCGGAATGCAAGAGGACTGTACTGCTTGTCCTCCAGGTGGTTTTTATCAAGATGAGTTTGCCTACACTGGAAGACTTTCCCATGGCATGGGATGTAAACTCTGCCCGTTAGGTCATTTTGTACCACCGCATGCTGCCCCAGGCAAAGCCATCACAGAATGCATCTTATGTCCACAAGGAACCGAATATGCCCGGTTTGCCGGCTTTAAAGGGTGCGAGTGTCTCTCGAGTTTTTATCGATTGGATCGATTTGGCCCATGTGTAAGATGTCCTTTACAAGGACTAACCTGCCAAAACGAGTCGGTAAGACTTCAGCCAGGTTTCTTCTGGAAATGGCTATCAAATGAAAGTCTTATGAAATACGAAGAATTTTCAGCAGATCTTTTAATCACCGACAACTCATACCAACAGCTCAGATTTCAAGGAACAATTCCACTCGTCTACAAATGCCCGGCACCTGAGGCGTGTCTCGGAGGCATGAGGTCAATGTGTTCCCATGGTTACGGTGGACCCTTATGCGCAGTGTGCAGCAAAGGACATTACCAACTGCTAAACCGTTGTCGCAAATGTCCCAGGATGCTTTGGTTCGTTTTACAAGTATGTGGAATTGTCATTCTCGTCGTTATTCTAACGGTAAGCATCTTTCTgggcaagaaaagaaaatgcgCATCTAATAGGACGGTGACTGACATGATACTAGCTCGACTTAAGATTGTCATTGGCTTTTACCAAGTTACTTCAGGGACATTGAACACATTTTCGTACGTGGAATGGCCTAGTGCGTTATTGACAGTAGTGCATTTTGCCAACATGGTGCAACTAAACCTGTTGGAGATTGTTCCTTTGCAGTGCTTTGACGACAATCTTACGGTAAATGTCTACACGAGGTTATTGCTTGTTGTGGGGTCAAATACTGCAATCATCTTCCTAGCAGCGTTTATTTACCAGATAAGGAAACTCGTGCTTATCAACACTAAGAAGCTTGCTGGTCCTGAATTGGCCGAGTCTCTTTCCTCCGATAAAACACAAATCTATCGCGTCGTCTCCCTCCTAATCTTTGTGACATACCCTTGGACATGCACAACCATCTTCAGCCTCCTGTCGCCAACATGTCAGCAGATCTGCTCCAACGCCGACTCGTGCCAGTACTTCTTGCGCGCTGACTTCTCAGTCCAGTGCTTCACTGACAAGTACAACAAATATGTGATTGCTGTTTACTTCCTTCTCATCCTTGTCGTTGCCATACCAATCATAGTCCTCTTTTTGCTATGGAAGTACCACCACAGAAAGATTTATGAAGAAGCCGAAGCCCAGAATAATAAGGGTAGGGAAATAGCCAATGGTTTGAGCTTCCTCTATGAAAACTACGCTCGACAGTGCTGGTTCTGGGAAATTATCGAGTTGGCTAGGAAAGTGTGGGTGACGTCGACGCTCTTTCTTATGGGGGCAGACACTCGAAGCCATCTCGGTACAGCCGCCATAATATCCGGGATCTACACCATTTTGGTGGCATATTACAAGCCAATCCGAGACACGTTTGAACACTGGCTGCAGCTGGTGTCACTTGTTGCCAACTTTATCACAATGAACGTTGGAATGCTGTTGAAAATACCAACGGAAGAGGATTCCTCGGGTAGCTTTGGAGAAAGGGACTCTGCTTTTGTTTCCGCCATTCTGGTGGCTGTAAATGTCACTGTTGTAGCGTTAATGGCGGTGCATTACATGTACACTTTCATCACTGCGGTTAAACACCTGAGAAGTAAGCCAAAGTGCGGAGCCGagtgttgtgtgacattcttGATGATAATGGTTGGAGCGGGAGAGGATGCTACAGACATTGACAGTGGAGGGATTCGAACCTCAGCTGTGTCACACGATATTAACTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11319	G PROTEIN-COUPLED RECEPTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04576	CALCR; calcitonin receptor	-	G protein-coupled receptors	ko04030	deepkoala