Detailed information of KAL9974366.1 in Oculina patagonica

Genomic Location: chr4:3229440...3234680
NR annotation: XP_020606488.1, ficolin-2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70497Ficolin-2 OS=Mus musculus OX=10090 GN=Fcn2 PE=2 SV=2
P57756Ficolin-2 OS=Rattus norvegicus OX=10116 GN=Fcn2 PE=2 SV=1
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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