Detailed information of KAL9974720.1 in Oculina patagonica

Genomic Location: chr4:7435087...7462025
NR annotation: XP_020623202.1, uncharacterized protein LOC110060744 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5F363Protein Jumonji OS=Gallus gallus OX=9031 GN=JARID2 PE=2 SV=1
Q92833Protein Jumonji OS=Homo sapiens OX=9606 GN=JARID2 PE=1 SV=2
Q1LVC2Protein Jumonji OS=Danio rerio OX=7955 GN=jarid2b PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02375JmjNjmjN domainFamilyInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF02928zf-C5HC2C5HC2 zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003349DomainJmjN domainInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR003347DomainJmjC domainInterproscan
IPR004198DomainZinc finger, C5HC2-typeInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11478JARID2, JMJ; protein Jumonji-Chromosome and associated proteinsko03036deepkoala

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