Gene detail

Detailed information of KAL9974888.1 in Oculina patagonica

Genomic Location: chr4:9663485...9671676
NR annotation: KAJ7360514.1, hypothetical protein OS493_015616 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G011988

ATGCGTGTTCGTGATTTTGTTTCTCTACAGAATCCCTCACTTGTCTTTGATGAAACGTCAAACATTTGGCTTCAGCCATTTTCTGCGCTGATCAACTGCATGTTCCCTGTGGAATATGTGTACGCCGATTGGTTTGGATGGCAAACAAACGACGAAGCATCGCGGGCAGATCCAGAATCTCTCACCAGTCCATCGGAAGCCACTAAAGAGGCTGGAAGTCGCGTTGAAGGATTCTGTATTCCTCAGTTTTTACTTAGAAAAAGTGATATTAAACGATTCGGTGGGCTTGACATTCAGGAACATTGGCAGCCTGATCGTGACACGATGACAGCAAATGATCCCTTTGTTGAAGATGATGAAAAGAAGCTGATACCTATTTTCACTGCTGAACATGCCGAAGACGACCCAAGATACGCAAAGCTCAGGCTGACCAAAGAGTGGAAAGATCATCGACCGCGTTACAAGAATGTTTCCTATCTGCACCATTCGTTTCAGCTCCCTTCAGCGGATCATTCCATGATTGACCTCGAATCCAAGGGCTTTGATGGCCAAAGCAGTGCGTGGTCATACGATCTCCATGGTCCTGTGCGAAAACTTCAATCAGGCGGTTTTCCAAGTTACGAGGAAGATCAGACAGGCGTTTTCAAGTATCCAGTCGCGTGGCCAGAGCCTGCTATGGAATGGCTGGTGCGACCGCGTCCAAGTGGTTGGCCCTCACCTGAGCTTGTCCAGGAAATATTTGACGCTGGTTGTCATTTAGCCCCTGTTGGCAGGGGGAAGCGCATTGATGAGCCCGTGGAAATGATTAATTATTGCCAAAACCCAGAATTGACAGAAGCCAGTACTAGTTCCACCGGTCTACCTGTGGAAGGACAACGGGTCATGGACGAAACGGAATGGAGAACATCCTTCTCCCTGGCCGAAAATAAGCTTGGAGAGAGTGTGTCAGCTGTGCAACGACACGTACTGGTTTTGTTAAAGATGATCAAGAAGTTTTACTTCCCTGATGTGATTTCAACGTATTATGTAAAGAACTTGCTGTTTTGGGAATGCGAGAGGAAAGAGGAAGATTTTTGGAAAGAAGGCAACTCCGCCAATTGCCTTTTATTCATGTTGGATCGTCTGGTGGAGTGTTTGAAGGCACATCATCTGCCACATTACATCATGCCCGAGAGTAATCTTTTGCAGTATGAAGATCCTATCAGTCTTAAGGAAGCCGCTGTGATTGTTAGTGAAGTAAGAAGTAACATTTTGCCAAAGACATTCAGTTTACTGAAAAGGCTTCAGTCATTAACCTATCAGTCCCAAACGTATCTTCAAGATCTTGGTTTACAAGACCACCTGTCAAGAATGCAAGACAAAAATCTCTCAGAGGAAGAGCACAGAGAGCTGCTGAGATCTCTTCACTCAATTTTTGTAAGCAAGTGCAAAGATGTCATTGCATGTTTACAAAGAATGGCACAAACAGAACGCAACATTGAAAAGTTGATTAATGTTGCTTTATTTGCTTACCAGTCGATTCTTGCGAGAAATCTTTGCAAGTTGTGGTTTCTCATGACCAAAAACGATGAGACCAACGACCAGAGGGAGAGCGAGGACGAGTTCAAGTCATTCGTGAAGAAAGAAGTCAAGGATCTTTCCTTTGATGACGACTTCCTTGCACTGGCATTTGTTTTCTTCGACAGAGCGAGGAATGAAAGTGAGCCCTCTTTGGCAATTCCTGGTTCAAGTGCGATGGTGCTTTTGAGAGACGAACAGATGAAGATAGCGGTAGAGGCCGTGGAAGAAGCCCGGGCACCACTGAAAGGAATGTTCGACTGGTTGAAGACGAGCGACTTTAAGAAAGTTAGCGAGAAAGCATCGAAGAGGCTTAGAGAGAAAACAGATGGCACTACAGTTACAGTTACGAAAGAAGAAATAGAGAGTGGCCGATGCACTCGGTCTGACACTGCTATGACTGGTGAAATAACATTGAGGGGTCTTGTTCTACCGGTTGGCGGAATCAAGGAGAAAGTGTTAGCTGCCCACAGAGCTGGACTGAGACGGGTGATACTACCAAGAAGAAACGAAAAGGATCTGTCGGAACTACCAGATAATGTTAAGGACGAGATGAACTTTATCTTGGCAAACCGAGTAGAAGATGTTTTGCGAGCTGCATTTGATGATGAATTTCCTGGCATGGCACAAGCTACCAGCAGCAAGTTATAG

Transcript

rna-ACROYT_G011988.t0

Protein

Uniprot

Uniprot term	Description
Q9DBN5	Lon protease homolog 2, peroxisomal OS=Mus musculus OX=10090 GN=Lonp2 PE=1 SV=1
Q3SX23	Lon protease homolog 2, peroxisomal OS=Bos taurus OX=9913 GN=LONP2 PE=2 SV=1
Q3MIB4	Lon protease homolog 2, peroxisomal OS=Rattus norvegicus OX=10116 GN=Lonp2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20266	Mab-21_C	Mab-21 protein HhH/H2TH-like domain	Domain	Interproscan
PF05362	Lon_C	Lon protease (S16) C-terminal proteolytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR046906	Domain	Mab-21-like, HhH/H2TH-like domain	Interproscan
IPR008269	Domain	Peptidase S16, Lon proteolytic domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR024810	Family	MAB21L/Cyclic GMP-AMP synthase-like receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10656	CELL FATE DETERMINING PROTEIN MAB21-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan