Gene detail

Detailed information of KAL9975591.1 in Oculina patagonica

Genomic Location: chr4:17354398...17358844
NR annotation: KAJ7337243.1, hypothetical protein OS493_010100 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G012769.t0

ATGGTCAATACATACAAGGTTGTATTATGTGGAAAGACTGGTGTGGGAAAGACGTCCATTTTCCGTCGCGTGTGTGGATTACCACTGCAGGACAGTAAGTCACGTCCAAGCAAAACTTTAAAGGATCATGAGCGTAAAGTAACAGTGGAAGTAGATGGTACAACAGTTGAGCTTATTCTGTGCGACACCTGTGGACTTGAAAGGCATGCACAGTTAACTCGCTCTCACTTTGTACTTAGCCAAGTTGTTCTGTTTGTATACAGTGCAACTGATAGGGATTCTTTCAGCCAAGCCATTGAACTGTTAAACTTTGTCAAAATCAATGCACAAGGAGCTTGCTGCATTCTTATTAGAAATAAGATTGACTTAGATGCAACTGTCAGTGAAGATGACGCAATGGCATCAATTCCACCCAATGCCTTTACACTTCAGTTTAAGACTTCTGCTGTAACTAATGAAGGAATTCAAGAAATGCTACAATCAGTGGCCTCCCATTTGATAAAGAAAGCCACACCCATGAAAACTACACATGTAGGTCGCACCGCATGTTCAACTGAGGAAACTGCTCGGTACAATTGTAATGGTCCTAATGAGATTATTACCTTGCAAATAGAAGATGATGCAAATAGCCCTCGAAGGAGAAAGAGATGCTGCTTTCACTAACATGACAAAcaatttacaataatttattattaaccCATCAATCTCGACATGATACCAAGTATCTACTGTTAGATAGTATTGAATATCCTAAGATTGACCAATCAGACTGCTTAAAATGCCAATAAAATATGTTTGCATGTAGGaatatctttttaaaaataacaaaattttatTACCGGTATCTGTTGTTAACAGGTACACATGTGTAATAAAGGCTTAAGTTTtaccgaaaaaaatatatattaatagcggagctcccagtggcccaaagggccgcagagcagagccccatacccatagaaaattaatcgacccatgcttttggtttttcttggtcatcatggctagtgGTATGGTTCGTGGGCACGTGTGCCCTAGCAACGACGATGTTGCCCCAACATGGCAGACATACTCTAGAaataggtttaaggttatggttaatatcagcttacatctttgatattggacatccatgtcatggtcaattgacagctgtcaaaacaaggtatctgctgaccagtatcacatgaccatatcgtgggctcacatatagaactcatcgaggtcgaatgttttttcgaagtttaccgctgaccaagtaatggtttacattggacCCCAGGCTCAAGTGCTCTATTTTTTCTGTTatcggtcagtaaattcggattttcGAAAAGGGTGaagtaaataaccggggagcttcgcttttaagcttggctaaatctatttaaatTATGCTTTATCTATAAGTTAATTTGAAgggataaaaataaataaatttcaaaatgatAATAGACAAATTCAGCTAACATGTTTACATCGTTGTTGCCACCCAAATCAGACAATGTGATGATtcctttgggaggttacaattgtGCAATATTTGTCACACGTAACTGAGCGCATGGGAGTATGAACGAACAGAacaattgtaacctcccaaaggaATCATGACATGATCTGTCGTGGGGGGCAACAACGATGTAAACATGTTAGCCGAATTGGTCTATTACATGGATTTAGCCTGCCAGGGCTGGCTCCATAGTGGGGTatagcaaaattaaaaacaacaacaacaacagtcaGAGAAGTTACCCAAGCATGGTCTGGGTAGGAAGATCTCTGTCTGATTTTCTTTCGTCTCACTCTACtctctcatttttttttcaccctaTTGGGGCTTTAGGGAGATGCCAGTTTACATGCTATGCGTGAATTGAGCTATTTTGTTCAATGATAATGGAACGTCAGCTCCATTTTAGTCAGTAAAATTATAGGCAAGGCAAAAGTTGCTAGAGCCTTCAAAATAATACAGTCCATAAATTATTAGAGGTGCAAAGCGTCCCATAAAAATATGCTTTGGGTTAATTAAAATAATCATACTCTATTTGCTAGATGGGAGTTATATAATGAATAATGCAAATCTGTttgataacaataaaaatgtctCAAACGGTAaagcaaaatagaaaaatagGCGCCTACAGGCGCGTGTGACTACTGCTAAGACGATGAAAATTACGAAAGTAGAATTGGCATATATATGCGGCTATATTTATTGTCAAACTGTCGGTCAGAGTGTTATATGGTGTATAAATCAGTGGTAATCAAGAAGATAATAGGAAGAGTCTGCATATGAGCTAAGTAGCCCATCAGgctgaagcttatcccggtttccttagcatttaACTAGAAGTGTTTctattccccctggatggaatgcaagtctattgcagggttaccccctagcAGTCAATTTTCCAGTTTCCATTTCAttaaacacctgggtgaagTGAGACACCATGAGAGTTACGTttcctgcccaagaacaaaacgccGCACCAGAGCTCGAACCCCGACTGCTTGCATTTTGATCAGTAGttcagcacactaaccattaggccactgcgcctcccacaaaaGTAACCAAAAATCGGCTCCAAAATACAACCCAAAAATTATTGGATAATCAAAAACAGtttcaattaatttaataaactTTAATATCAAACAAGAATGATACAACAACTTAGTGAGATCTATTTAACAGAAGTTGCTACATCGTTATTTTGTATATCTATAGGTAACAAGAACAGAACATAATTATTCAAAGCATTGCAGAACAATTCATATTTGCTTTTGGTTTGCCTTTAATAGAAGCACAATAGGTTTGAATTTCTCATTTTCTGATCTTGAGAAGTCAAGTGGATAGTGTTCAGCTACATATCATAGTATCTACAACTGTACCCATCAAGATATTATTGGTGTTCGAAAAGGTGTCCGCGTTGAACTTTTTAACTTATATACAAAtgggtttttctttttactgtaATCGGTAAAAACTTCACACTTTCTTGGTGAGAGGCACACTGCTCTGCAGgttatttgtttgttcatttcCTTGTAATTGGCaatcaaaaaactttttttaattgtataCACAGGAGAAAAACTGTGTTTGTATTAACCGGAAACTTTCATTCATCTTCTATGCCTGGAAGTTGTTTAATTACCTGTAAATACTTAACTTGAATGATTTgcaataaagaaataattattgctgaatttagtaaataaaggtTGCAATATTagtaaa

Protein

Uniprot

Uniprot term	Description
P36862	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1
Q55BW0	Ras-related protein rapC OS=Dictyostelium discoideum OX=44689 GN=rapC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47978	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07841	DIRAS2; DIRAS family, GTP-binding Ras-like 2	-	GTP-binding proteins	ko04031	deepkoala