Gene detail

Detailed information of KAL9978262.1 in Oculina patagonica

Genomic Location: chr4:43766002...43775164
NR annotation: KAJ7370614.1, hypothetical protein OS493_031350 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G015760

CTGCTTAACACGTTCATCGCTGCTGAGCCTGGCTGGCGTTGCGTCCAGAATGGTAACAACAGCGAATGTAAAGTGAACGAAACCGTGTACCTTGGAGATGACAGATTTTATGACAGATGCGATATGTCCAGGGAAGCCTGGGAGTTTGTTGACGACTACACATCCGCTGTCACAGAGTTTGACTTGGTGTGTGACAAGGAGCTGTACGGTACTATCTCGTCCTCCTTGGTCTATCTTGGCTCGCTGATCGGAAGCATCGTTATGAGCACTTTATCAGACAAACTGGGCAGAAAAAAAATCACATTTGGTGCTGGTTGTATAGTTTCCATTTTTAGTCTGCTGACAGCTTTCCCGAAAGTCTACTGGCTCTTTGCTGTCTTCCGGTTTTTCGTTGGTTTTGGCTTTGGAGGAGCAGGAATCACAATTTTCGTATTGGCCCTCGAGTTCGTGGGCATTAAGCACAGAAGCATGATGGGAACATCTTTGTGGTATTCTTTTTCTCTGGCTGCTATGACCTTAGCAGGGATTGCTTATCTTAGCACAGACTGGAGGATACTGTGCATAGTGACTGGGGCACCAGCGATCCCACTCCTGATTGGCTACTGGTTTACTCCAGAGTCCCTTCGCTGGCTGTTAGTAAAAGAAAAGAAAGACGAGGCCATAACACTCTGCAAGAAGATTGCGCACGTCAACGGCAAAGAAGTATCTGAGGGAGACATAAACTTCGAAGGCATGGAAGTAGGCCAAAGACTGGGCGACCTTCGGGATTTGTTCTCGTCTCGAAGTTATGCTAAAAAGACGCTTATAATGTGGTATTGTTGGTTAACAAATGGATTGATGTATTACGGTGTCTTCTTCAGCATACCGTATATTGGTGGCAATATGTACCTGAACTTCTTTCTTGCCAGTGTCATTGACCTTCCGGCAATCCCAGCAGGCATTTGGATCTACAACAGGTTTGGTCGCAAGAAAGGTGTCTTCATTCCCATGCTGTTAGCCGCTGCTGGTGCTGCTGGCTCAGCAATTTTAGCAACCTATGGCGATCCGGATGATGGAATTCTTTCCTTTACCATAAAAGGAAATATACCTTTTCCCGCTATGCACAGACTACATACTCATAAATGTCACTCGTGGGAGGATAAGGATAAGGACGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGAAAAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGACGAGGAGGACGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAGGAGGAGGAGAAGGAGGAGGAGGAGAAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGAAGAAGAATGAAGAGAAGGAGATGGAGACGAGAAAAAGTGGTTGTGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCTGGAGGTGGTGGGGGAGGAGGAGAATGACGAGAAGGAGAAAGGATACCTTGCCGGCCAGATCATATTAGCCATGATTTGGGCAAAATTTTGGATCACGGTATCATATGACGGCATATTTCTTTATGCAGCAGAACTCTTCCCAACGGTTGTCAGGAACGTTGCCATGGGAACATCGGCCAGTGCTTCCTATATTGGTCAGTTTGCTGCCCCTTACGTTATCTTTCTGGCACGTGTTCATCCGATCTTACCGTATGGTATCATGGCAGTGACTGCGTCAGTGGCCGGGCTACTTTGTGTGCTTCTGCCGGAGACTCGATACCAGCCAACATTGGAGACGTTGGAAGGGAAACAAGAAGAAGCATGGGATACGAAGTTTTAG

Transcript

rna-ACROYT_G015760.t0

CTGCTTAACACGTTCATCGCTGCTGAGCCTGGCTGGCGTTGCGTCCAGAATGGTAACAACAGCGAATGTAAAGTGAACGAAACCGTGTACCTTGGAGATGACAGATTTTATGACAGATGCGATATGTCCAGGGAAGCCTGGGAGTTTGTTGACGACTACACATCCGCTGTCACAGAGTTTGACTTGGTGTGTGACAAGGAGCTGTACGGTACTATCTCGTCCTCCTTGGTCTATCTTGGCTCGCTGATCGGAAGCATCGTTATGAGCACTTTATCAGACAAACtgggcagaaaaaaaatcacatttgGTGCTGGTTGTATAGTTTCCATTTTTAGTCTGCTGACAGCTTTCCCGAAAGTCTACTGGCTCTTTGCTGTCTTCCGGTTTTTCGTTGGTTTTGGCTTTGGAGGAGCAGGAATCACAATTTTCGTATTGGCCCTCGAGTTCGTGGGCATTAAGCACAGAAGCATGATGGGAACATCTTTGTGGTATTCTTTTTCTCTGGCTGCTATGACCTTAGCAGGGATTGCTTATCTTAGCACAGACTGGAGGATACTGTGCATAGTGACTGGGGCACCAGCGATCCCACTCCTGATTGGCTACTGgTTTACTCCAGAGTCCCTTCGCTGGCTGTtagtaaaagaaaagaaagacgAGGCCATAACACTCTGCAAGAAGATTGCGCACGTCAACGGCAAAGAAGTATCTGAGGGAGACATAAACTTCGAAGGCATGGAAGTAGGCCAAAGACTGGGCGACCTTCGGGATTTGTTCTCGTCTCGAAGTTATGCTAAAAAGACGCTTATAATGTGGTATTGTTGGTTAACAAATGGATTGATGTATTACGGTGTCTTCTTCAGCATACCGTATATTGGTGGCAATATGTACCTGAACTTCTTTCTTGCCAGTGTCATTGACCTTCCGGCAATCCCAGCAGGCATTTGGATCTACAACAGGTTTGGTCGCAAGAAAGGTGTCTTCATTCCCATGCTGTTAGCCGCTGCTGGTGCTGCTGGCTCAGCAATTTTAGCAACCTATGGCGATCCGGATGATGgaATTCTTTCCTTTACCATAAAAGGAAATATACCTTTTCCCGCTATGCACAGACTACATACTCATAAATGTCACTCGTGGGAGGATAAGGATAAGGACGAGGAGgacgaggaggaggaggaggaggaggaggaggaggaggaggaaggagaaaaagaaggaggaggaggaggaggaggaggaggagaaggaggaggaggaggaggaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggaggaggaggaggaggaggaggaggaggagaaggagaaggagaaggaggaggaggaggaggaggagaaggaggaggaggaggaggagaaggagaaggagaaggagaaggagaaggaggaggaggacgaGGAGgacgaggaggaggaggaggagaaggagaaggagaaggaggaggaggaggaggaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggaggaggaggagaggaggaggagaaggaggaggaggagaaggaggaggaggagaaggaggaggaggaggagaagaagaATGAAGAGAAGGAGATGGAGACGAGAAAAAGTGGTTgtgatgaggaggaggaggaggaggaggaggaggaggaggaggaggaggagctGGAGGTGGTGGGGGAGGAGGAGAATGACGAGAAGGAGAAAGGATACCTTGCCGGCCAGATCATATTAGCCatgatttgggcaaaattttgGATCACGGTATCATATGACGGCATATTTCTTTATGCAGCAGAACTCTTCCCAACGGTTGTCAGGAACGTTGCCATGGGAACATCGGCCAGTGCTTCCTATATTGGTCAGTTTGCTGCCCCTTACGTTATCTTTCTGGCACGTGTTCATCCGATCTTACCGTATGGTATCATGGCAGTGACTGCGTCAGTGGCCGGGCTACTTTGTGTGCTTCTGCCGGAGACTCGATACCAGCCAACATTGGAGACGTTGGAAGGGAAACAAGAAGAAGCATGGGATACGAAGTTTTAGCTACGGCGAGGCTGTGTTATGGAATAGCTTaccaaatgaaataaaaaggtCG

Protein

Uniprot

Uniprot term	Description
Q9WTW5	Solute carrier family 22 member 3 OS=Mus musculus OX=10090 GN=Slc22a3 PE=1 SV=1
O88446	Solute carrier family 22 member 3 OS=Rattus norvegicus OX=10116 GN=Slc22a3 PE=1 SV=1
O75751	Solute carrier family 22 member 3 OS=Homo sapiens OX=9606 GN=SLC22A3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24064	SOLUTE CARRIER FAMILY 22 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan