Detailed information of KAL9978701.1 in Oculina patagonica

Genomic Location: chr4:48966328...48982480
NR annotation: XP_020602176.1, plastin-3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3V0K9Plastin-1 OS=Mus musculus OX=10090 GN=Pls1 PE=1 SV=1
P13796Plastin-2 OS=Homo sapiens OX=9606 GN=LCP1 PE=1 SV=6
Q6DG81Plastin-3 OS=Danio rerio OX=7955 GN=pls3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR039959FamilyFimbrin/PlastinInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:0051639Biological Processactin filament network formationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP