Detailed information of KAL9978723.1 in Oculina patagonica

Genomic Location: chr4:49307366...49322461
NR annotation: CAH3118116.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15818Neuronal pentraxin-1 OS=Homo sapiens OX=9606 GN=NPTX1 PE=1 SV=2
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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