Gene detail

Detailed information of KAL9980524.1 in Oculina patagonica

Genomic Location: chr3:7986665...7994812
NR annotation: XP_020623429.1, monocarboxylate transporter 10-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G009124.t0

CACAAACGGGCCGGGCCCGTGGGCAGAATGACGAATTATTCCAAAGATTTCCCTTACGATTCTCGCAGATCTTGGTTCGTATGCGGATCTTCGTTCGTCGTTCAATTTATTATCTTCGGCGTACACAGTTCTGTGGGGATTTTCTTTATTGCTTTTGGGAGGGAATTTCACCGCAGCGAATCTGCTACAGcaTGGGTAGGCTCGCTGGCGTTTGGTGTCATGTTTTTCCTAGGACCTCTAACCACCGCGCTGTGCGAACACTTGGGATGCCGGGTAGTCACGTGCGTCGGAGGCGTTCTCTCATTCGTGGGTCTTCTATCGACATCATTCGTCACCAACTTCACTTTGTTGTACGTCACGTATGGGCTCCTCTGGGGAGCTGGGACGAGTTTTTGTTACTTCCCCTCTCTAGTCATTTTACCGTCGTATTTTAGAAACTATTTATCACTGGCTTACGGGATTGCCATTGCTGGAGCTGGATTGGGTGTTCCGCCGATGACGTGGGCCATCAATCAACTTATCGATCACTATGATTGGAGGGTAACGATGCGAATTCTTGCTGGAATGTCATTGTTAATGTGCGTTTCTAGTTTGAGTTACGGCAGACCTGACAGTGTGGTAGATCAACGTGTTCAACTGCAAAAGAGAAACCTACATAGGCAGGGAGATATTGGCATTCTTAACAAGTTTAAATTACGTTTCGTGGAATTTGTTAGTTTGAATCCCTGGAAAAATAAGGCCTTTGCGGTGTGGGCCATTTCACTGAGTTTCATCGCGTTTGGAAATTTCATACCGTTCGTCTTTTTGATTAGTATTGCCAACGACATTGGTATACCCAGCTCCAAAAGTGCCTTACTCATTGGTTACCAGGCCTTCACGCAAACGGCTGCCCGAATAGCGTTCGGAAGGCTTGGGAATAGTCCCCGAATTGACAGAGTAGCATCCGTTCAAATAATAGGCCTCGTGTTGGCTGTCAACGCCACACTGTTTCCTCTAGCAAAGACTTACTTATCTTTAGTTGTATATGTTGTAGTGTTTGGTCTTTTCGATGGATGCTTAGCTGTTATGTTCGGGATGGGTACCCTGTATATTGTCGGAGAGAAACTTGTGGGGCGTGCCTTTGGGAACCTTTGTTTCGCGGCGGCCATTGGAAACGTACTGGGTCCCCCTGTGGCAGGATTCATCTTCGATGTCTTTGGAAAATACGACATAGCATTTTACCTTTCCGGTGCTGTCATGACATTTGGAGTTTGTCTGCTCTTCCTAGTGCCATGGCTAATGCCATCGAAAACAGAACTATGTCAAGAAAAGGCTATGCTTTTAAACGAAAGTGACAAACTGGCTAAGGGATCAACTAATTACAAAAGACCGTCGAGGACAATTTACAGCTTCCCCACCGAAGCAGCTTTCTTTGCGAGGGCAGCGCATCATGACCACGTGTTACAGCGTAGCGTTTCCATggagttgctaagcaacaggGGTACGTCAAGTTTAATGAAGTCGGCAATGTTCCGCGCGTGGTCAGCCGCTGCCCAGTTGCACTGCACTGACTCTTTGAATGAATCGTCTGGGTATGAAAGCGATAGCAATAGGCAAAGCCCTTCTTCACAGTCCAGCGAAGTCGTGGATACGTCAGAAGAAAACAAACTTGGTTCTTTAACTATAGTAACACCAGCTATGAGCTTTGACGATCTAGAAGTAGTTGTTCAAAAAGAGAAACTTGTAAAAGAGGGATGGTATGCTAGTTCCATGGACATGTTTAGTGTaatgtttgaaaatttattAGAACATGAAGTTGCTACTCCTCGAAATTCAATCATTGATAGTACAAGCAATGGAAACGACTTTATAGATGTGAGTGAAACAAGAACAACGACAAGACTTTCACAGACAGAACTTAGCCACAACTTGGAACTTTGTCAAGAAACAATTCTATAAATGGATTTTCGCAGGCGCGAAATCAATTAAATCTACGTTTTACTTCGTGCCTGTTTtaaggcattttttttattctaatcAATCACGCTACGTCTTCACTTTAGGTGGAACAATTGCTACACGACTTGGACAAGTTCCTCTTTGAAGCAAAGAGAATTTGCCCAACTGTCACCGTCACTTCCTTATTACAGACGACGAATTTTCTTGGAATTATTCGCTTaatcacttgttttttttttctttaaaaaaaaacaacaggacCTGCACACAATCCAAACCAACTTCTACATGAAACAGACGAACGTGTTTACAACTGGGAAAAGAAGTTGCAGATTACTGTTTATATAAAGTTAAGGGGGAAGAACGAATTTATAGGACAATTTTTTGGAATTATTCGCTTAGCTAGCTTTACGATTATTTGCAGGCaaatttttggtaaaattaTCAACTAAGTAATTTAAttgatatttaatattttataaaagtttGAATTATACGTGAATGTAAAACGAAGGGAGCTTCAAAGAAGCAGGGCATATAGAAGCTATTTTAAACTTCTAAAAGAACTAATTTAATTGTTTCCGTGAAACGTATATCTTTAGCGCTTTTCAGTCTTGAATTAAGAAAACTTTCAAACCCAGATCAAATAGAGCTTTTTTATAGAGTGTCGAAAAATctctctagccaatcacaagggaAGACAGGCAAcatagtgaaccaatcaaagctcaAAACAAAGCCATATCGCCGacggaaagcgcgggaaaacgtgtgtgagggAGGAAAGCTTGGTGtgggttttacttctgattggttaaaacaaatggtttttaaaccaatcgcaAAACTTGGTAACGCAAAACCGTATCTAATGTGAATTACTTTcggcactcaagtgaaaactgctctatttagACAAATCAAGAAAGCTAACTCGTGTCTTTACTTATTAATAAAAGTATTAACGCGCCTTTGTTTTTTGTGAAGTCCATGTTTCCCTGTGTCGTGACTTTTTTTGTAAGTTCTTATATTGCTAGTTTTCATGTggagtttaaattttgttgtgaATTGTAAGTTGTTTATAAGCAGATTATAC

Protein

Uniprot

Uniprot term	Description
A1L1W9	Monocarboxylate transporter 10 OS=Danio rerio OX=7955 GN=slc16a10 PE=2 SV=1
P57787	Monocarboxylate transporter 4 OS=Mus musculus OX=10090 GN=Slc16a3 PE=1 SV=1
Q7RTX9	Monocarboxylate transporter 14 OS=Homo sapiens OX=9606 GN=SLC16A14 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08187	SLC16A10; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 10	-	Transporters	ko02000	deepkoala