Gene detail

Detailed information of KAL9981176.1 in Oculina patagonica

Genomic Location: chr3:15434512...15440632
NR annotation: KAJ7377303.1, Protein phosphatase 1D [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G009846.t0

GCCAGAGTTTGCATCTATATAAAGCGGTGCGAGCCTTGAACACAGTCAAAAATGTCCAAGAAGACGAAAACCAGGAAGATTATCGTTCGGGTAAACGGCCAAGCGAATCAGGGAGGAAGAAAAGAAATGGAAGATTTTAAACGCGTCGTGTTCGATCGAGATCCGGAGCAAGCATTTTTCGCGGTCTTCGACGGCCACGGTGGACGAGACGCGGCCATTTTCGCCCGGGAACACTTATGGGACACGATAAAGCAACAGAAAGGATTCTATTCCAGCGAAACGTCCCGTGTTATCAGGGCCATAAAGGATGGATTTATGGCGACACACCGCGCAATGTGGAAGCAGATAGATTCTTGGCCTCGCACAAGACACGGACTTCCAAGTACAGCCGGGACCACAGCAACTGTTGTAATCCTCAAGGGTAGAACGCTGTACATAGCACACGTGGGCGATTCAGGCGCAGCACTCGGGAGACTGAGTAAGGAGAAAAAACTTCAAGCCGTGCCTCTTACCGCTGATCATAAACCCGACGTTCCGTCGGAAAGGATTCGAATTGAGTCCCTTGGTGGAAAGGTCCTCTCTCGGAACGGTGTGCCACGGGTAGCATGGAAGAGGCCCGTCCATCATGGCCACAAGGGACCTGTCAGAAGAAGCACCCAGACGGAATCAGTGCCCTTCTTGGCGATTTCAAGAGCACTTGGAGATCTgtggagtttcgactattacaGAGGTGAATTTATAGTCTCCCCAGTACCCGACGTTCGTGTGTACAAGATCACCCCTGGTGTCGACAAGTTTTTGGTCATTGCATCAGATGGCCTGTGGGGGGTGATGAGAGTCGAAGAAGCGGTTAAATTTGTTTACCATTTCGACAAAGATGACCTTTTAAAAGGAGGAGACGTGTCACACAGGCTGATTCAGCGCGCGTTGTCAAGATGGCGCGAGAGGGACCTTCGAGCGGATAATACAAGTGTCATAGTGGTAAACTTTGAGGAGGCCGAACAGGGAGAACCGGTTAATAAAATGCCTAGACTGGAAACACCTGAGAGCGAAGAGGAGTCGGACACTGAAACTAAAGAATCTACGGACTCTTCCCAAGACAGCGACAAAACACCCAACCAAGACCCAACTGCGTTGTCTAGTGAAAAACCAACGCTAGTTAGAAAACTGGCGTTTCGTTGTTCGGACCCAATGCAACTGACTTCTTGCGTGAATCTCAGTTCGAACAAGTCTTCTGGAAGTTCACCTGAAAAACTGTCACCGTTCAATCCACTAAGCAATGGCCATTCTTCGCCGGTGGTGTCGAATTGTCTCTCGTGAATGTCCACGTTTATTTAGTGGCATCAAGAGAAAATCACCACGGAGAGTCGCTACCCGTTAACCGTTCAACTCTTCGAAAATCTATTTTAAGATTCTCGAACTTGGTCACGTGCACAAGCGGCCTTATGTGATTGGTTACTATTTTAGCTAGAACGTAGATTGTTAGTGGTAAAATTGGTTTGGAAAATTGTTTCAACGGGGTATTTTGTCGGAGTTTTTAAAAGCAAgaatgaatttttaaattgtatatATTGTACATAGTAAATGCACTGCATACGTGAGCTTTTCGAtttaaatatgtaaaaaaaaaaactaaatataaatGTACTAAATGTATTCGGTAGGTAGGGTAACGCGCTTTTCACAGTACTCTATAGAAATATATCACCGATActgaaatttttcttattttagcaTACGGAATAATAATTTACGTTGTAGTGGGGATCTTTTTCATTGAAGCTCTATAGTTATCACTTTCATCAACATAAAAATAACTTGGCGAAACCTAATAATATTACATTGCATTGTACAGTACTAAGCAGGATAGTTTCCCCGGTCCAACCTTAACGAGTTGATCTCTTGACCGAGTTAATCACGTTATGAGTGGGAAAAAGAAGTGTCCGGCTACTGTACCAATAACTGAATAAAAAAACGCGAAATGAAGAATAACGCGAGTCAAGAACAGAACTAAATAATTTATAATCAGTGAGCTATTTCCATAAAGAAATCGATATGCAAGTCTTAACCAAATGTGACGAatgttaaattatttattagcAAGCGAGTTGGTGGCaggaccagaaaaaaaaaaacaagggaaataaaaaatctAATTTCTAGC

Protein

Uniprot

Uniprot term	Description
O15297	Protein phosphatase 1D OS=Homo sapiens OX=9606 GN=PPM1D PE=1 SV=1
Q9QZ67	Protein phosphatase 1D OS=Mus musculus OX=10090 GN=Ppm1d PE=2 SV=2
Q9SD02	Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana OX=3702 GN=At3g51470 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR000222	Binding_site	PPM-type phosphatase, divalent cation binding	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47992	PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0035970	Biological Process	peptidyl-threonine dephosphorylation	Interproscan
GO:0045814	Biological Process	negative regulation of gene expression, epigenetic	Interproscan
GO:0051019	Molecular Function	mitogen-activated protein kinase binding	Interproscan
GO:0043169	Molecular Function	cation binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10147	PPM1D, WIP1; protein phosphatase 1D	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala