Detailed information of KAL9981807.1 in Oculina patagonica

Genomic Location: chr3:24171408...24205254
NR annotation: XP_020614422.1, mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6JPI3Mediator of RNA polymerase II transcription subunit 13-like OS=Mus musculus OX=10090 GN=Med13l PE=1 SV=2
Q71F56Mediator of RNA polymerase II transcription subunit 13-like OS=Homo sapiens OX=9606 GN=MED13L PE=1 SV=1
Q5SWW4Mediator of RNA polymerase II transcription subunit 13 OS=Mus musculus OX=10090 GN=Med13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11597Med13_NMediator complex subunit 13 N-terminalDomainInterproscan
PF18296MID_MedPIWIMID domain of medPIWIDomainInterproscan
PF06333Med13_CMediator complex subunit 13 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021643DomainMediator complex, subunit Med13, N-terminalInterproscan
IPR041285DomainMID domain of medPIWIInterproscan
IPR009401DomainMediator complex subunit Med13, C-terminalInterproscan
IPR051139FamilyMediator complex subunit 13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48249MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15164MED13; mediator of RNA polymerase II transcription subunit 13-Transcription machineryko03021deepkoala

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