Gene detail

Detailed information of KAL9981970.1 in Oculina patagonica

Genomic Location: chr3:26203673...26222460
NR annotation: XP_020602658.1, transmembrane protein 116-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G010744.t0

AACAACATGGCGCCTGCATGGACTtcttttcgtttgtttgttaaCTGAAAGACTTCTTTTTCGGAGCACACAACGCATCATACAGTAAAATAATCGCCATTTTGAAGAGTTCCTGGATGACAGAGGTGGCTGGAAAGGTTCATTTTATGAGATTTGCCGTTTTTAGACGGTTAACCAAAGGATCCATAGACTAGCCTGCGCCGCCGACTCAAGCCGCCGACGAAACTATCAAAGATAATGGCGAACTACACAACGAGCTCAACTAGAAATGTTTCCGGAAACGGTGCAGTGGTTCGTTGCCTTTATAACACCGTGGACGACGAGGAAATGaaaaagctTATTGCAATTATTTATATTGTGACATCAGTGCTAAGTATCCTTGGAGCTGGATCAGTGATAATTTTTGCCATTGTGAAAAGAATTGTAAGAAGCCCAGAGGTTCACCCTTTGTTCCACTTAGCCTTAGCAGACTTGCTTCTCTGTTCTCTGTGGTTCTCTGGAGCCTGTCTTTGGTTTCATGACAAACATAGCAATTGCTTTATCTTGCATGTTTTTGGAGAGATAGCACATCTTGCGTCATTCCTTCTGACTGTCAACTATGGTTTAAATGCATTCATCAGACTCCAAGAGAAGGTTCATATTATCAGCCAGCTGCAGTTGCAGTTCTCCTCAGTTTCATCAAGTAGATTTTACATTTGGCTATCCAGGATATTTTATGCTATGTGTTGGTTGATCCCTGTTGCTATTATGGCCCCTTTACTATTTCACTCTGAAGACATTGCTAGTTCTGAAGACTGTACACGTTGTCTTTTACTTTTTGATCGACCAAAGGCACAGagtGGTCAAATGAAGTCAGATTCAGTGTGGGGATATTATGGTTCAATAGCACTGATCTCCACATTGTCCTTTTCCATTGTAGCCCTTGTGctggTATATTTTCTGATGCTCCGAGTTTACAGAAAGGCTGTTATTTATTCAGGAGTATTAACAGACCTTCAGCGGGCCAGCATAGACGCCATCCGTAATAAAATCTTCTTGTACATACTGGTGTTTTTGATATGCTGGAGCCCAGCACTGGTGGTAGCATTGTGCGACTACGATCCCAAAATATCACTCACAAACATGCGTCATTGGTTTGCCCTGTTTGTGGTGCAAGGTCTGACTGCACCCATGCAAGGCTTTTTAAACTGTATAGTGTACGGCTGGTCCAGAAAGAGCTTCCGTGACGCTTCGGAGCAGCGAAGAAATATGTTGCTGGATTCCGACGAATATGTCTCTTCTCAACGCCGACGGACCTCTTACGGATCCATGGGTTCATTATGATAACAACACCATGGCAAAGACTGCAAGGAAAGTTCATTCTCCCGTGCCGTGTTTAGCGTGCtaggcttgtcacgcaatcttgtctcGAAGGAGGGATGGCGTGACGAGTAAAAGAGAACGTCAAGATTGAGAGAGATCAAAAGATTGCATGAACCAAATACAAGTCTTTTACACGGACGCGGACGATTCTATTTTGGCTTGTAACACGGTCCAAGATTGCGTGACTTGCCAAGAAAACTACGGAAGGTTTTAACAAGTGCTTTGGGCGTGTTCCGAACTCACCCGAGTTCTAGCGTCACGTTTTGTCAACATAAAGTAATAGTTTTCTGTTTCTTACTTAAAATATGGCGTGTAACAGAACTGTGTTAAAATACCGTATTATCCGCCTAATAATCCCGGGGCCCCTGGGGCTTACAAATAAGTAAGGGAGTTTTTGATGGAGTATTACTGCGGGGTGGGGAGTGGGGCGCTCATAAGACAGATTCTCCACTAGATTCCTGCATGCAGACTAACTGCACGACCATTCTAAACGCGTTTTATGAATACAAATTATCGCATAAGGAAAGATTGATATCGTTTTTATTCATGAGTTCTTATTACCACATCGCCAACTAGAGAGTCTTGTATATAAAGTGTACAGCACAATAAGCATAAagtaatttatttcaaaaccatATAGGTTTATTCCTAGCTGAGGTTAGGCAGGAAAATGCAGTGAAATATTTCTAAACGAATGCCTTTCCTAAAAGACAACTACTTAACATTAAGATGCTGCAATCAAAGCTGCCGCTAGTAGTCAAGTGTCTTTTCACTTGATTTGGGAGGTGTTTTAATTAAAGTGTGGCTGGAACTATCTCTCGAGCAAAAATCTCCAGTTTCGATCTAAAAGGGAACTATCCTCGCAAggttagcctgcagaacaggcgttttattttttgcagtgtTATTGCGAAGCGCGCCCcacgagcgcgaagcgcgagggaaaataaatttttcCTTCGCGCTTCGCGTTCGCCCTCGCGTGACCCGCTAAATAAAAGCCTAGCACTTcgcgcttcgacccgcaaaataaaccgcgtGTTCTGCAGGCTACGCAAGGTGGGCTGGGAAGTGTTGGGTTTCATTAAAAAAGTTCGATAATAAAGAAGACTTGGTGTAAATTGTATTGATTTATTCTTTGTTGTATTGTCATGCTTTTCAGGCTTCAGTATTGACAAT

Protein

Uniprot

Uniprot term	Description
A2BGS3	Transmembrane protein 116 OS=Danio rerio OX=7955 GN=tmem116 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11970	GPR_Gpa2_C	G protein-coupled glucose receptor regulating Gpa2 C-term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR022596	Domain	G protein-coupled receptor GPR1, C-terminal	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23112	G PROTEIN-COUPLED RECEPTOR 157-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08470	OA1, GPR143; ocular albinism type 1 protein	-	G protein-coupled receptors	ko04030	deepkoala