Gene detail

Detailed information of KAL9981985.1 in Oculina patagonica

Genomic Location: chr3:26388681...26393273
NR annotation: XP_020602619.1, fibropellin-1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q863B4	Trefoil factor 3 OS=Canis lupus familiaris OX=9615 GN=TFF3 PE=3 SV=1
Q03403	Trefoil factor 2 OS=Homo sapiens OX=9606 GN=TFF2 PE=1 SV=2
B4X8D9	Trefoil factor 3 OS=Felis catus OX=9685 GN=TFF3 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR017994	Family	P-type trefoil, chordata	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan