Gene detail

Detailed information of KAL9982120.1 in Oculina patagonica

Genomic Location: chr3:28475089...28532663
NR annotation: XP_020620497.1, protein strawberry notch homolog 1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5BJL5	Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2
Q5F371	Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1
Q689Z5	Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13872	AAA_34	P-loop containing NTP hydrolase pore-1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039187	Domain	Strawberry notch, AAA domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR026741	Family	Protein strawberry notch	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12706	STRAWBERRY NOTCH-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0031490	Molecular Function	chromatin DNA binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14454	GOT1; aspartate aminotransferase, cytoplasmic	EC:2.6.1.1	Exosome	ko04147	deepkoala