Detailed information of KAL9982248.1 in Oculina patagonica

Genomic Location: chr2:270673...279374
NR annotation: CAH3139637.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2
P57756Ficolin-2 OS=Rattus norvegicus OX=10116 GN=Fcn2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR024731DomainEGF domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10104FCN; ficolin-Lectinsko04091deepkoala

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