Gene detail

Detailed information of KAL9982498.1 in Oculina patagonica

Genomic Location: chr2:3035912...3052355
NR annotation: XP_027059811.1, uncharacterized protein LOC113686392 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G004547

ATGACTCGAAAAGTCCTTCCCACATGGAGGCGCTACCTAACGGTGGAACCTGTGATATTTTTCTACGCATTTGGATTGATGATGAGCATGCCATTATGGAGGCAGTACATATACCACGTCATCAGCAAGAAGATGGGCTTCCCTTACGAAGAGTTAGTGATGGAGAAAGATGAGCCTGGCTGTGGAGAACACTTTACTGGGCCAAACTCTACCTATCTGAGGGATCTGGAACAGGAGGTGCAAAGTCTGGCCACAAAAATCGACTTAGGGAATACGTTCTTTATGTCCATACCATCGCTTATCGTGGCACCATTTTGGGGGCCTTGGACAGACAAGACTCGCCGGAGGAAACCTGCTCTCATCGCTCCTGTGATTGGCGCACTGTTTCATGCTGTAGTGGTACTCTTGGTTATGTACTTTGAGTGGCCTTTGTATGTGATGTTTGTGGGATCAGCAATCAGCGGCTTTTCTGGATTCCTGACAACAGCGATGTTAGCTACTATGTCGTATATCGCTGATACCACCGAGAAGGAGGGAATAGCCTTAAGACTTTCAATCATGCAGATGATGGTCTTCATGGGTGGTGTCTTAAGTCAGCTGACCAGCGGCTTATGGATCCACACGTTCGGGTATATCGCTCCAACCTGGCTTATTCTCGCCTGTAACATAGCCGCTGCCCTCACCATCATCTTCCTTGTCCCGGAAAGCCACGAGCCAGTGACCAACGTGGACAACAAATTCTTCGATCTCAAGAGCTTAAAGACGTTAGTGAACGTCTTCAAAAAGAAACGGGAAGCGGGAAGCCGGAAAAAACTGCTGCTTCTTGTTTGTGCTGGAGCAGTTATTACCCTAACCACTATGGGGCTTGGAGGTGTTACAGCTCTTTTTGTCATGAGGAGTCCCCTTTGTTTCAGTCCCAAGCTTCTTGGATACTTTTTGGCTTACAGAATGTTCATTTCAGGGGTAGGGGGACCTATTGGCGTCAAGTTGTTAAGGAAGTGCTTTAGTGAGATGGTAACTGGTGCGATATCGATTGTCAGTCAGGTCGGTGAAATGGTACTATTGGCGTTTGCAACTAGCAACTGGTTGGTCTTCACTGCACCAGTGCTCGGCCTTTTCAAATCAACTGTAAACCCAATTTTGACCGGCATTATGTCAAGTATAGTTGGGGATGATGAACAGGGTTCCTTATTCTGTGCTTATGGTTTTATGAGCGTCTTTTCCCAGTTTTTGGGTGTCATGCTGTTTAACAACGTATACGAAAGCACTCTTGGATCCAGTTTCAACGGCTTTGTATTCATTCTATGTGCCGCTTTGAAACTCATCCCGTTATGTTTCCTCAAGTGCATTCACGTTTCACCTGTCGCCGAACAACGCGAAGAGAAGAGAGAAGAACTGAAAATGGAGGACGAAGAAGAAAACGGCAATAAACTGGACGAGAAGTTGATCAAGGACGACAGTAATGACCAAGAAAACGATAGTGGAAGTGACAAACTGGCATTGGAACTCGGAGATTATTGCCCAGAAGATATTGAGCTGATCACAGAGTCAGAGATGCCATCGACCGCCAGCATTTCGTTTTGGAGAAAATACTTCTCAGTAGAAGTGGTAGTGTTTTTCTATTTTTACGGGTTCCTAATGTATTTCCCCATTGGAAGCATTTACATATACCAACGAGTCAGTGAAATGAAAGGCTTTCCATATTGGAACATCAGTCAAGGAGCGGATGGAAGTGGCTGTGGCGGAGACGACCTGGGAGAAAATTCAACACTATGGGAGCTGGAACAAGAGGTGCAAGCACTTGCTTCCCAGCTTGGCGTGGGGTACAACCTTTTCCTGTCCATTCCGTCCCTTCTCGTGGCGCCCCTGTGGGGCCCGTGGACAGATCGAGGAGGCAAAAGAAAACCCGCTTTATTGATTGCCATAATAGGCGCCTGCTTAGAGATGGCCACTGGCCTGGTCATAATGTACTTTGAGTTGTCTGTGTACTTTTTCTATTTGTCCGCCGCTTTAAGCGGTTTTTCAGGATTTGCGACCGTTTTGATGGTTGGGGCAACAACATACGTAGTCGATACTACCACCGAAAAGGAACGAGCGTTTCGTATAGCTGTGATGCAACTGGCAATTTTCATTGCTGGTGTGATCAGTCAGCTGACCATCGGTTTTTGGATAGAAAATGTAGGTTTCATTCCTTCCACGTGGTTCATATTGGCCTGCTATATTCTCGCTGGGATCTGGGCGCTATTCTGTGTACGGGAAGTTCCTAAACCGAACAACAACGAGACCACCGTTCGTTTTTTCAGCCTTGAAAACATCAAGTGTTTTGTGAAGCTGTTTCGAAAACGAACAGACGCTGGACGTAGGAATTTAATACTGCTGATGGTATGTGGTGGCCTTGTCTTCTTGACAACTGTAGGTATCGATGGAGTTGAGTCATTGTATATTTTGAAGAGCCCTTTATGTTGGGGTCCGACGCTGGTTGGATATTACTTTGCATTTGAAATGTTTTCCCACGGTATTGGTAGCGTGGTTGGCATTCCTTGCTTAGGAAAGTGCTTTAAAGAGTTGAACGTTGCTCGTGTTGGTATGGTTACCATAATCTTATCTTCCATTTTACTGGCGTTCTCGGATCGTACTTGGATGGTGTTTGTTGTGGGTGTAGTCGGCGTCTTCAATGCTGTCTGTGATCCAGTCATAATGGCCAGAATCTCAAGTATAGTGTCGGAGGACGAACAAGGCGCCTTGTTTTCCGCTTATAATATGGTGATAACCTTGGCTCAACTCGTTGGCTCAGTGATATTCAATACTGTGTACCAGGCCACTCTCGGGCTGACATTCCAAGGCTCCGTGTTTATACTGTGTGCAGTGTTGGTACTTCTTCCTTTTGCACTTGTCAGTTGGATAAAACCTTCGCCTGTTGCTAGCGACGACAAGAAGGAAGATGGCCTTGAATTAGAGAGAAGAAGTGGCCAAAAACAAGCCCAAGACACACCAACAGAAGAGTTGCGATTATAG

Transcript

rna-ACROYT_G004547.t0

ATGACTCGAAAAGTCCTTCCCACATGGAGGCGCTACCTAACGGTGgaacctgtgatatttttctaCGCATTTGGATTGATGATGAGCATGCCATTATGGAGGCAGTACATATACCACGTCATCAGCAAGAAGATGGGCTTCCCTTACGAAGAGTTAGTGATGGAGAAAGATGAGCCTGGCTGTGGAGAACACTTTACTGGGCCAAACTCTACCTATCTGAGGGATCTGGAACAGGAGGTGCAAAGTCTGGCCACAAAAATCGACTTAGGGAATACGTTCTTTATGTCCATACCATCGCTTATCGTGGCACCATTTTGGGGGCCTTGGACAGACAAGACTCGCCGGAGGAAACCTGCTCTCATCGCTCCTGTGATTGGCGCACTGTTTCATGCTGTAGTGGTACTCTTGGTTATGTACTTTGAGTGGCCTTTGTATGTGATGTTTGTGGGATCAGCAATCAGCGGCTTTTCTGGATTCCTGACAACAGCGATGTTAGCTACTATGTCGTATATCGCTGATACCACCGAGAAGGAGGGAATAGCCTTAAGACTTTCAATCATGCAGATGATGGTCTTCATGGGTGGTGTCTTAAGTCAGCTGACCAGCGGCTTATGGATCCACACGTTCGGGTATATCGCTCCAACCTGGCTTATTCTCGCCTGTAACATAGCCGCTGCCCTCACCATCATCTTCCTTGTCCCGGAAAGCCACGAGCCAGTGACCAACGTGGACAACAAATTCTTCGATCTCAAGAGCTTAAAGACGTTAGTGAACGTCTTCAAAAAGAAACGGGAAGCGGGAAGCCGGAAAAAACTGCTGCTTCTTGTTTGTGCTGGAGCAGTTATTACCCTAACCACTATGGGGCTTGGAGGTGTTACAGCTCTTTTTGTCATGAGGAGTCCCCTTTGTTTCAGTCCCAAGCTTCTTGGATACTTTTTGGCTTACAGAATGTTCATTTCAGGGGTAGGGGGACCTATTGGCGTCAAGTTGTTAAGGAAGTGCTTTAGTGAGATGGTAACTGGTGCGATATCGATTGTCAGTCAGGTCGGTGAAATGGTACTATTGGCGTTTGCAACTAGCAACTGGTTGGTCTTCACTGCACCAGTGCTCGGCCTTTTCAAATCAACTGTAAACCCAATTTTGACCGGCATTATGTCAAGTATAGTTGGGGATGATGAACAGGGTTCCTTATTCTGTGCTTATGGTTTTATGAGCGTCTTTTCCCAGTTTTTGGGTGTCATGCTGTTTAACAACGTATACGAAAGCACTCTTGGATCCAGTTTCAACGGCTTTGTATTCATTCTATGTGCCGCTTTGAAACTCATCCCGTTATGTTTCCTCAAGTGCATTCACGTTTCACCTGTCGCCGAACAACGCGAAGAGAAGAGAGAAGAACTGAAAATGGAGGACGAAGAAGAAAACGGCAATAAACTGGACGAGAAGTTGATCAAGGACGACAGTAATGACCAAGAAAACGATAGTGGAAGTGACAAACTGGCATTGGAACTCGGAGATTATTGCCCAGAAGATATTGAGCTGATCACAGAGTCAGAGATGCCATCGACCGCCAGCATTTCGTTTTGGAGAAAATACTTCTCAGTAGAAGTGGTagtgtttttctatttttacgGGTTCCTAATGTATTTCCCCATTGGAAGCATTTACATATACCAACGAGTCAGTGAAATGAAAGGCTTTCCATATTGGAACATCAGTCAAGGAGCGGATGGAAGTGGCTGTGGCGGAGACGACCTGGGAGAAAATTCAACACTATGGGAGCTGGAACAAGAGGTGCAAGCACTTGCTTCCCAGCTTGGCGTGGGGTACAACCTTTTCCTGTCCATTCCGTCCCTTCTCGTGGCGCCCCTGTGGGGCCCGTGGACAGATCGAGGAGGCAAAAGAAAACCCGCTTTATTGATTGCCATAATAGGCGCCTGCTTAGAGATGGCCACTGGCCTGGTCATAATGTACTTTGAGTTGTCTGTGTACTTTTTCTATTTGTCCGCCGCTTTAAGCGGTTTTTCAGGATTTGCGACCGTTTTGATGGTTGGGGCAACAACATACGTAGTCGATACTACCACCGAAAAGGAACGAGCGTTTCGTATAGCTGTGATGCAACTGGCAATTTTCATTGCTGGTGTGATCAGTCAGCTGACCATCGGTTTTTGGATAGAAAATGTAGGTTTCATTCCTTCCACGTGGTTCATATTGGCCTGCTATATTCTCGCTGGGATCTGGGCGCTATTCTGTGTACGGGAAGTTCCTAAACCGAACAACAACGAGACCACCGTTCGTTTTTTCAGCCTTGAAAACATCAAGTGTTTTGTGAAGCTGTTTCGAAAACGAACAGACGCTGGACGTAGGAATTTAATACTGCTGATGGTATGTGGTGGCCTTGTCTTCTTGACAACTGTAGGTATCGATGGAGTTGAGTCATTGTATATTTTGAAGAGCCCTTTATGTTGGGGTCCGACGCTGGTTGGATATTACTTTGCATTTGAAATGTTTTCCCACGGTATTGGTAGCGTGGTTGGCATTCCTTGCTTAGGAAAGTGCTTTAAAGAGTTGAACGTTGCTCGTGTTGGTATGGTTACCATAATCTTATCTTCCATTTTACTGGCGTTCTCGGATCGTACTTGGATGGTGTTTGTTGTGGGTGTAGTCGGCGTCTTCAATGCTGTCTGTGATCCAGTCATAATGGCCAGAATCTCAAGTATAGTGTCGGAGGACGAACAAGGCGCCTTGTTTTCCGCTTATAATATGGTGATAACCTTGGCTCAACTCGTTGGCTCAGTGATATTCAATACTGTGTACCAGGCCACTCTCGGGCTGACATTCCAAGGCTCCGTGTTTATACTGTGTGCAGTGTTGGTACTTCTTCCTTTTGCACTTGTCAGTTGGATAAAACCTTCGCCTGTTGCTAGCGACGACAAGAAGGAAGATGGCCTTGAATTAGAGAGAAGAAGTGGCCAAAAACAAGCCCAAGACACACCAACAGAAGAGTTGCGATTATAGAAACTGTGAATTAGCGCACAAACTCAAAAAAACGTTTAGTTGAGAACATATTATAGGCAGGCCATGAAATGGTTTATATTTTATCCAGATGCTATTCTACTTTCGTGACTATTGCAAGTCTAGACACTACCAAAGTTAACGTAAAACGAGTGAACATTTACTAAACATGCGAATGGAATTTGGCATTCCAACATAG

Protein

Uniprot

Uniprot term	Description
F1NJ67	Proton-coupled folate transporter OS=Gallus gallus OX=9031 GN=SLC46A1 PE=1 SV=2
Q6DCX5	Proton-coupled folate transporter OS=Xenopus laevis OX=8355 GN=slc46a1 PE=2 SV=1
Q6PEM8	Proton-coupled folate transporter OS=Mus musculus OX=10090 GN=Slc46a1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23507	ZGC:174356	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20840	SLC46A3; MFS transporter, PCFT/HCP family, solute carrier family 46, member 3	-	Transporters	ko02000	deepkoala