Gene detail

Detailed information of KAL9983196.1 in Oculina patagonica

Genomic Location: chr2:12116457...12120837
NR annotation: PFX23886.1, RNA-directed DNA polymerase from mobile element jockey [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q6DGA6	Allantoicase OS=Danio rerio OX=7955 GN=allc PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03561	Allantoicase	Allantoicase repeat	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR015908	Domain	Allantoicase domain	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000256	Biological Process	allantoin catabolic process	Interproscan
GO:0004037	Molecular Function	allantoicase activity	Interproscan