Detailed information of KAL9983272.1 in Oculina patagonica

Genomic Location: chr2:13278894...13279464
NR annotation: RXN18968.1, Transposon Ty3-I Gag-Pol [Labeo rohita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q00962Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) OX=31557 GN=ORF V PE=3 SV=1
P03554Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) OX=10648 GN=ORF V PE=3 SV=1
P03556Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) OX=10645 GN=ORF V PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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