Detailed information of KAL9984302.1 in Oculina patagonica

Genomic Location: chr2:26976316...26998440
NR annotation: PFX32101.1, putative RNA-directed DNA polymerase from transposon BS [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P85521Scavenger receptor cysteine-rich type 1 protein M130 OS=Bos taurus OX=9913 GN=CD163 PE=1 SV=2
A1L0T3Scavenger receptor cysteine-rich domain-containing group B protein OS=Mus musculus OX=10090 GN=Ssc4d PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR001190DomainSRCR domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP