Detailed information of KAL9984533.1 in Oculina patagonica

Genomic Location: chr2:29727649...29745899
NR annotation: XP_020604923.1, short transient receptor potential channel 5-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
P14381Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR002153FamilyTransient receptor potential channel, canonicalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015279Molecular Functionstore-operated calcium channel activityInterproscan
GO:0034703Cellular Componentcation channel complexInterproscan
GO:0051480Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04967TRPC4; transient receptor potential cation channel subfamily C member 4-Ion channelsko04040deepkoala

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