Detailed information of KAL9984991.1 in Oculina patagonica

Genomic Location: chr2:34997515...35012369
NR annotation: KAJ7383624.1, hypothetical protein OS493_026810 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NZR2Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens OX=9606 GN=LRP1B PE=1 SV=2
Q9JI18Low-density lipoprotein receptor-related protein 1B OS=Mus musculus OX=10090 GN=Lrp1b PE=1 SV=1
P35951Low-density lipoprotein receptor OS=Mus musculus OX=10090 GN=Ldlr PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP