Gene detail

Detailed information of KAL9986031.1 in Oculina patagonica

Genomic Location: chr1:839260...843316
NR annotation: XP_028418164.1, uncharacterized protein LOC114543334 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G000087

ATGTTTTGCGCAAATTGTGGCACTAATGTGCCACCAACAGCACGATTTTGCGTGCAGTGTGGACAAGTTGTCGAGAAACCTCTTAATCAAGCTCAGTGCAGCAGCACAGAATCAATCAGTGTTAAGTCTTTTGCTGACTTCCAAAAAAATAAAGGAAAAGAGTGGAAGGAGAGAGTGTCTAAGAAAGGCAAGAGTGTAAAAGGCAAAAAAGATGACAAGAAGGGAACAAATGACGAAAAGGAAGTTATTATATTCATAGGTCTGGTTGAGTGGAGCGAAAGTAGTGAATATCTAAAACGAAAACATGGAAAGCGTATGGCACTAAAAGTGAGGAAAGACGACCCACCTGCCGTGCTGCTTAATAAAGCACTTGAAAAGTGGAAAGCATATTTTAGCAATTGCTATGATGGTGGCGAAGATTACGTTCTCCTGTTGGAAGATTTTAAGGAGGCCACTTTCTTGCCTGGCTCGAGCAAAGAATTTTTTACCTTAGATCGTTACCGAGAAGAACTGGGGAAGGACTTCAAACGCATTACATTGTTCCTCTGTACATTGTCAGACTTTAGATTGTCAGAAGGTGGGGTCGCTGCCGATGGGGAAAAGCCTGATGGTTCGTTGTGGGATGAATCAATAGATCTTCCAGATGCAGTTAACGGAGATGGCGACAATCTTCCTGAAAGCAGTAAAGAGGTTTTGGACGTAGATAAGCAGGACCAGGAACAGGGCCATGAAATTGCAGGTGAACTACAAAGTCAAGAGTTGCAAATACAAGATGACTTTGAAATTGCCCAAGCAATTCAAGCTAGTTTTGATAATGATTTACAGGGCAGCAATCAAGAAGAAATGCCAGTCGAAGGAGCAGTAGACAGTGCAGCTTTTAGTGACTACACGTCTGTTGTACAATCTCTTGAGAAGCACGTTATTGCATCTGAACAGTTCTTTCTTGTTGTCAGGCGGGGGATCCCTTTTCAGCGAGCAATCTCTTTGTGGCAACGTGAGAGCAAGCGAAATTCTCCAAAGAATCGTGTCACGGTAAAATACCTTGGAGAGGAAGGCATCGACTCCGGTGCCTTAGCAAGGGAGTACTTCTCGGACACCATTACACAAATAGGCAGCACCTTGTTTCCTGGAGGATCCCCAGTCGAATCCACGCTTTTTGTCCGAAATGAAACCTTCAGGACCGCAGGAGAAATCGTTGCCACAAGCCTGGCCCAAAACGGCCCACCTCCCAACTTTCTTAACGCTGTAACATTTGATTCACTGATAAACTTGAACATGGACATAAGAGCTCTTTCACCTGAAAAACATCTAACCTCTGAACAGCAGAAGCTATTTGACACCATCAGAGAAGATGTGGGTAACCACCAAGATTTAATCATAGAACACGGTTACACGGGAGTCATAAATGAAGAACATATTGACGACATCTTGGGATCAGTCTTGGTCAGTATTTGGCATAAAAGAGTTCTCTGCCTAAACGAGTTTAGGCAAGGAATGGATCTTTATGGACTTTCAAGTATTCTTTCACAGAGTCCAGATGCCTGCAAACCGTTGTTCATCAAGGGGCATATAAGTGATGTCGATGCTAACTATCTGGCTGGAGCACTAAACCCACGATACTCTCCTGAAGGCTCCTCACGAAGACTCGTGGAGGAGAAAATTGTGGATCACTTTCAAGATTTTCTGCTCAGCTTAGAAGATGACAACATCACAGGCTATTCTGCCCCAATAGCGTGGAATTATGAAGATGGCCTGCTTCAGGACAGAGCAGAGATCCCCGAAGAACCATCTGAAATGGAAAAATTTCAAACACCTGAATTGAATGCTGCAGGAGTCATGGGATGGCTGACTGGCCAGCGACACAGAGAGGTGAATGGGACAAAAGTACAGATAGCCATAAATTTCGATCATGATTGCAAGATCCGCGCTCCTAATCACACTGTATGTTTTCCTTATGTTGGAGCGTGTGGGATGGAAATTACTCTTCCCATTGAACACATGAACACCTATGAAGATTTCAGACATGTATTTACGTTGGCTTACTGCAAAGGTCAAGCCTTTGCAAAACCATAA

Transcript

rna-ACROYT_G000087.t0

cggagcTGTGTTCACTCGTGTGACTTTTTACCGAGGATGTTTTGCGCAAATTGTGGCACTAATGTGCCACCAACAGCACGATTTTGCGTGCAGTGTGGACAAGttGTCGAGAAACCTCTTAATCAAGCTCAGTGCAGCAGCACAGAATCAATCAGTGTTAAGTCTTTTGCTGacttccaaaaaaataaaggaaaagagTGGAAGGAGAGAGTGTCTAAGAAAGGCAAGAGTGTAAAAGGCAAAAAAGATGACAAGAAGGGAACAAATGACGAAAAGGAAGTTATTATATTCATAGGTCTGGTTGAGTGGAGCGAAAGTAGTGAATATCTAAAACGAAAACATGGAAAGCGTATGGCACTAAAAGTGAGGAAAGACGACCCACCTGCCGTGCTGCTTAATAAAGCACTTGAAAAGTGGAAAGCATATTTTAGCAATTGCTATGATGGTGGCGAAGATTACGTTCTCCTGTTGGAAGATTTTAAGGAGGCCACTTTCTTGCCTGGCTCGAGCAAAGAATTTTTTACCTTAGATCGTTACCGAGAAGAACTGGGGAAGGACTTCAAACGCATTACATTGTTCCTCTGTACATTGTCAGACTTTAGATTGTCAGAAGGTGGGGTCGCTGCCGATGGGGAAAAGCCTGATGGTTCGTTGTGGGATGAATCAATAGATCTTCCAGATGCAGTTAACGGAGATGGCGACAATCTTCCTGAAAGCAGTAAAGAGGTTTTGGACGTAGATAAGCAGGACCAGGAACAGGGCCATGAAATTGCAGGTGAACTACAAAGTCAAGAGTTGCAAATACAAGATGACTTTGAAATTGCCCAAGCAATTCAAGCTAGTTTTGATAATGATTTACAGGGCAGCAATCAAGAAGAAATGCCAGTCGAAGGAGCAGTAGACAGTGCAGCTTTTAGTGACTACACGTCTGTTGTACAATCTCTTGAGAAGCACGTTATTGCATCTGAACAGTTCTTTCTTGTTGTCAGGCGGGGGATCCCTTTTCAGCGAGCAATCTCTTTGTGGCAACGTGAGAGCAAGCGAAATTCTCCAAAGAATCGTGTCACGGTAAAATACCTTGGAGAGGAAGGCATCGACTCCGGTGCCTTAGCAAGGGAGTACTTCTCGGACACCATTACACAAATAGGCAGCACCTTGTTTCCTGGAGGATCCCCAGTCGAATCCACGCTTTTTGTCCGAAATGAAACCTTCAGGACCGCAGGAGAAATCGTTGCCACAAGCCTGGCCCAAAACGGCCCACCTCCCAACTTTCTTAACGCTGTAACATTTGATTCACTGATAAACTTGAACATGGACATAAGAGCTCTTTCACCTGAAAAACATCTAACCTCTGAACAGCAGAAGCTATTTGACACCATCAGAGAAGATGTGGGTAACCACCAAGATTTAATCATAGAACACGGTTACACGGGAGTCATAAATGAAGAACATATTGACGACATCTTGGGATCAGTCTTGGTCAGTATTTGGCATAAAAGAGTTCTCTGCCTAAACGAGTTTAGGCAAGGAATGGATCTTTATGGACTTTCAAGTATTCTTTCACAGAGTCCAGATGCCTGCAAACCGTTGTTCATCAAGGGGCATATAAGTGATGTCGATGCTAACTATCTGGCTGGAGCACTAAACCCACGATACTCTCCTGAAGGCTCCTCACGAAGACTCGTGGAGGAGAAAATTGTGGATCACTTTCAAGATTTTCTGCTCAGCTTAGAAGATGACAACATCACAGGCTATTCTGCCCCAATAGCGTGGAATTATGAAGATGGCCTGCTTCAGGACAGAGCAGAGATCCCCGAAGAACCATCTGAAATGGAAAAATTTCAAACACCTGAATTGAATGCTGCAGGAGTCATGGGATGGCTGACTGGCCAGCGACACAGAGAGGTGAATGGGACAAAAGTACAGATAGCCATAAATTTCGATCATGATTGCAAGATCCGCGCTCCTAATCACACTGTATGTTTTCCTTATGTTGGAGCGTGTGGGATGGAAATTACTCTTCCCATTGAACACATGAACACCTATGAAGATTTCAGACATGTATTTACGTTGGCTTACTGCAAAGGTCAAGCCTTTGCAAAACCATAACACTTGATATAGCCTGTGTCCAAATACAAGGAAAGATTTTCGCACAGCCCCATTcgttaattatgtatgcaactattttaTACTATCACTCGacacaaacagcaatcatgagaaagaacgaatcagtcacaaaattgcatgcataattaatgtatggggctgtgcagAAATCTTGCCCAATGCAAATTAGCCATGTCATCTATAAGAAGTTAATCACGATGCTGTTTATCAGAAAATCGGCATGTCTTAATGATCACTTGCCTTAGTAGTTTAAATTGATTCAAGGTTGTTTGTTTCTTACAAACCACgtgccttaattttttttttaacctgttAGTTTTGTTGGATTCGTACATCCGGACAGTACACCAAGTGTTAACACATGTTTTGCACCTGTATTTATGTTGAAATTCACTTTTTGTATTCGATGAAAGCACTGCTTTCATCAAACGATGTGATTAACTTTTGGGGCAACGAGAACAGAGCCTTGTAGCTTACTGTGATAAAGACCGTGCCAGTTGAGTGCCGTATTCGTTTTATTCTTAATAGTTATCGTTTGttgaatgtttgttttgttggaTTGTACATCCTGACAGTACAACTGAACTGACTTCTGATCTCTTTTTTGACAGTTTGAACATCCGTTTTTGCACGTTTTTCGCATTCACTTTTTGTATGTGATGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13240	zinc_ribbon_2	zinc-ribbon domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026870	Domain	Zinc-ribbon domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala