Detailed information of KAL9986375.1 in Oculina patagonica

Genomic Location: chr1:5652533...5671233
NR annotation: XP_020631932.1, LOW QUALITY PROTEIN: fibrillin-3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q61555Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2
P35556Fibrillin-2 OS=Homo sapiens OX=9606 GN=FBN2 PE=1 SV=3
Q5R7B8Kelch-like protein 20 OS=Pongo abelii OX=9601 GN=KLHL20 PE=2 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00683TBTB domainFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR017878DomainTB domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR036773Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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