Gene detail

Detailed information of KAL9986458.1 in Oculina patagonica

Genomic Location: chr1:6840597...6846851
NR annotation: XP_020625958.1, uncharacterized protein LOC110063325 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G000611.t0

AATCATATTCTGCTCGGTTAGTCGACCATGCGAAGTAGCTGTAGTTGAAAATACTGGAAAAACAGGTTTATCATCGGCCCCATCAATCATCCAGAGGCTACAAAATTCTAGGGAGTGTCTGATCGATTTCTTTACTGCTGGCACTCAATAAAGCTGCGTGTCCTTGAAAGTCGACTTTGGTTTCAATTTAAATTAGCAAGAAACGTATATCAAGCAAACATGGCCGAAGAATCAGCTCCTCAGGCAGTTCCACAGGCAGGAAGAGAGACCGAGGCCAAAGCATTCTTTGACAGAGTAATCTCTCCTTTCATTGACGAAGCTTCTGATGCCAAACTGTTGGAGTCGCTTATGGTTCACCTGATAAAAGATGAGATGAAAAAGAAAGAGGCTCATGGACCCCCAGTTATGCCAGCAGAACGCGACCTTACGCCTGTTTCGACCGTGGAGGAAGTCACAGAAGCCATTCTTAAAGCcaaaaacgaaaagaaagccCTTCGCGTCGCTGGATCGGAGCATTCTGTAAAAGATGCCATTTTTCCCAAGGGTGGCGTTACCCTGCTGTTGACAAAGGATCTGCGTAAAGTAGACATTCAAAAAATAGAAGAGGCTGGTGGAAAGAAATGGCTGTACTGTCGCATCGGCGCAGGTTGCTACCTGGGTAATAATCCCATGGATCCAACATCTGACATACAGGACTCAGCTTGTTATCAGGTTAATGCCAATGGATTCGGCTTTCCCGAGCTAGGAGGTATCATCCATCAGACCATTGGCGGCTTTATCTCCACAGGCTCTGCCGGGGGAAGCTTACAGCACAGCTTTGGTGACGTAATACAGGAGATCGAGTTCGTGGATGGTAATGGTCGTCTTCAGACGGCAAAGCCTGGGACTGACCTCTGGTGTGCAGTCGGTGTTTCTATGGGGCTGTTTGGCGTCATAACCCACGTGACATTCCGCCTTCCTGAAATGAAGTTTGTTGAAGGTTCTGAGTCAAATCACGAGTTTGCCGATTCTATGCTTGGACCCAACGAGAAAGGAGAGAGCAAACTGAAGGAGAGCCTTGAAAAGCACGAGTACATGCGAGTGAACTGGTTCCCGCAGAAGGAAGTGATGCGAGTTCAGGAGTGGGTTGGAAAGCAGTCTTTTGCTGTTGGAGACGTTGTGCCTTACAATTCCATCTTAGAAAACATCTTTGCGGCCGGTATGGCAGCCATCGCCTTGGCTATCTGCAATTTTCTCCTGCAAAAGCCAGAACCAACAGAGATTGATTACGAAATAATCGGCGTCATTTTGCGTCAATTTGTGCCCCTTAATAAGAAACCAGTCATGTTCCGCGATGTATGGTACGAGACTCTTCCCATGGATGACGAGGCTCACACCGACTTTATCATCAGGGTCGATTTCACTGAGATTTGGATCCCACTCAACCAATGTCAAACCGTCATGGACAAACTCCAGGAGCTGTTCAAGAATCAGAAAGCCGCCAACAACTTTGCCACAGAGATCtatggcgccaagaagtctccATTCTGGTTGAGCATGTCATATGGACAGGATATGGTGCGAGTTGATCCTTACTGGTGGGCTCACAACAAGGGCGATCTCAGGGTGTTCTTCTCATACTACTGGGATGTGTTGCTGGATATCCCTGGAACCCGCCTGCACTGGGGAAAGTACCTTCCCCTGCCGGATCAGCAATGCGGGAACACAAAGTTCAACCCAGACTATCTGAAGGGCGTGTACCCAAAGATGAATGATTGGTTGAAGTTGCGGCAAGAGATGGATCCTGACCAAGTGTTTGTGACCGAGTACTGGCGTGGCATCCTTGGAATTAAACTTTCCCCCGCTAGTCAGTAAAGACGCAAATGAACTGTGGTTTGAAATCATTTATTTCTATGCTTTGAAGCTGTAGTGCCATAGAGGTCAAGAAtacaaatttacattttacaagATAAATGAGCAGTAGTACAAATAACAATCCAGACTTTTAAAGTTTCGTTGACTCGAAAATATTTGTAGATCACTAATGTGTATTTTTTAACTAAGAAGAAAAATCCCGAGATATAGACATGTCACATGGATTAATTTAAAAGTCAAGTACTTAACCCTGTCCCTTTAGCCAGCTGAAGTGAAAATTTATGGACgataaaaaaacataaataaggAAATGATTGTGACATTTAGGGTATTAAACTGAATCAACTGTAACACTTCCATGTttaatgttttctgttttttttt

Protein

Uniprot

Uniprot term	Description
Q6BZA0	D-arabinono-1,4-lactone oxidase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ALO1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04030	ALO	D-arabinono-1,4-lactone oxidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR010031	Family	L-gulonolactone/D-arabinono-1,4-lactone oxidase-like	Interproscan
IPR016171	Homologous_superfamily	Vanillyl-alcohol oxidase, C-terminal subdomain 2	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR007173	Domain	D-arabinono-1,4-lactone oxidase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43762	L-GULONOLACTONE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016899	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	Interproscan
GO:0003885	Molecular Function	D-arabinono-1,4-lactone oxidase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan