Gene detail

Detailed information of KAL9986475.1 in Oculina patagonica

Genomic Location: chr1:7062707...7104869
NR annotation: XP_020600852.1, histamine H2 receptor-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G000630.t0

GTTTTGAGCGTTGCCAAGCAACCCTGCCTACATAAAACTAGAATAAAGGGGCGTCCTGGTTCATTTCTCAAGCCGTCACTTTCGCCTCGTTGCTACTCGTTTGTGTCAGTTTATCTAAACCGACATAAAATATTACTATTCTCCTGGCTAAGACACGAATTCATTTTGTGCTGCAACAGAGATCAGTAGccgacagacagacaaacacaAAGGAAGACTTCAGGGTATTTGCCTTCTTTCTTGAGAGGAGTTCATCAACAATAGATTGGTATCGTAAACAACAAGGCCTTTTTTGCCTTTCACGGCGAGGTGTGTCTAAAAAGACTGACCGCGGAACAAATTTTGAACCGAACTCCCTAGACAGAAAATAACTCTGCTAAACTTAGCCACGAATAGATAAATCAAGTAACTGGTTACCAGAAAGCCCACGAAAATTGCTAAAAGATGGATAACAACAACGATAGCAACGCCACAGATGACGAATTTGACATGGAAGAGCCGTTCACGAGCGACCAAACGGGAGCGTTCGTTCTTTATGGGTTGCTTTCGTTTTTCATCGTCATAGCAAACAGCTTAGTTTTACTGCTGATCTGGCGAAGGAGACGTCTTCGTACCACGTCCAACACAATGCTCGCAAGCCTTGCATTCAGCGATCTTCTGACAGGCCTGCTCGCGGTGCCGATGGTGATAGCTTGCTCCGCAACGTTGCAGCTCGAAGTGTGCATCGCCATGGATATATCGAATCGCTTCCTGGCTTTCTCGTCCGTGGGCCATCTCATTCTTTTATCAATCGACCGCTACATTAGAGTAACGAAGCTCCTACAGTATCCCTCAATCGTGACTGAGGAGAGAATCAAATGGGCACTCGCTTTTGCCTGGGGATTTGCACTGCTAGCTTCGACGATACAACTCATCTGGATTCTGGCAGTTCTGGACGACGAAACATTGATTCGCATTGAGCTTGGctacgattttttccacatggCTGCCCTCGTCATACTACCCCTGATCTTTATGGGCGCTATCTACACCAAACTTTTCATTCACCTTCGCAGACAAAGCAATGAAATCCACAGTGAACTGTCTCGACGCTCACGCTCGGCGTCCCGCGTCAATGCCGGCAGACGAAAGGTGAACGAAAAGAAGATCGCTTCGCTGTTCATTGCAATGATCGCAGTGTTCATATTTGGCCTGTTTTTCTATTTTCTGTGGGCTATAATGGATGATCTGGAGATGGCAGGGCTCCACAGCATATCGCCAAAAGCCATGAATGCAATAGTGACCAGCatcattttctttcgttttttgaCCGCGTTATGCAACCCACTTCTGTGCACGTTCATGAAACAGGACTTTTTAGACGCATTGAAATCCTTTACTACCGGACTTCGTGGATCACAAAGAGTCTAAAGGGGCTGTGTCATGGATTTAAGCTAAATTTTGTAGGCAAGGAAAATGACCgacaaattcggtgaaatatgaaaataaccTCTTTAAACAACGAAGGAACAATTTAATAACACAACAAttcaaaagaaggtacggatggctaaaagtgaagaagattgaaacggattgcgatatgggtttttgaaatattcttGGGccgaacagttttcaaagttaatttcgtttgcttgtaattttaaattatagcACCAGGTAGACACATCAGTTTGGTTGCAACGAAGTTTGTCATtcagatccatagaattaatttcgtttgcttgtaattttaaattatagcACCAGGTAGACACATCAGTTTGGTTGCAACGAAGTTTGTCATtcagatccatagaagtaatttccttgcaaacattaagtttcaaagCAAGTATTTggtaaaacttaataaaatagacTTAATTCAACCgtaacacagtccctttaaacggGATTCGATTTGTTCAAATTACTCTGCATCAAGATTAACTTTAAAGCTGAGATTAACATTAGATTACAGGATTTTAATGCAAGATATTCAGCGCACTTGACTTTTCCTTCTCGATTTGAGGACTTCGTTGTATATAAACTGACAAGAACAATAAGGTTTTCAGTTTTTGTACATATTAATAAATACATGTTTGGTTAAGGGACTACATTAATTCAGTTTAAACACCTTTCTAGTCAGTCTAAAGTGTGGCTTGGTCGTTTTCTTCGTGCCcggataaaaagaaaatctcCAAGAGGAGATAATGTATGAcatgtcaaaagaaaacaaaggacgatttaacaaaaaaaaaaagtattaatTTTATGCATTTAGTCAAGTTGTTTTAGGAGTTGGTAGAAATATATAGCAAAAGGAAACAGACATTTATAAGGAtatatttgtcaacaaaatgtaTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050569	Family	Trace Amine-Associated Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24249	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04150	HRH2; histamine receptor H2	-	G protein-coupled receptors	ko04030	deepkoala