Detailed information of KAL9987072.1 in Oculina patagonica

Genomic Location: chr1:14449443...14500690
NR annotation: XP_020630064.1, probable E3 ubiquitin-protein ligase HERC1 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00622SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR051625FamilyDiverse Signaling and Regulatory Domain-Containing ProteinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR035768DomainHERC1, SPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22872BTK-BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

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