Genomic Location: chr1:16435164...16458264
NR annotation: RMX56976.1, hypothetical protein pdam_00016974 [Pocillopora damicornis]
| CDS | ||||
| ACROYT_G001447 | ||||
| Transcript |
| rna-ACROYT_G001447.t0 |
| Protein |
| KAL9987188.1 |
| Uniprot term | Description |
|---|---|
| Q2VL90 | Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa OX=9823 GN=CD163 PE=1 SV=1 |
| Q2VLG6 | Scavenger receptor cysteine-rich type 1 protein M130 OS=Canis lupus familiaris OX=9615 GN=CD163 PE=2 SV=1 |
| P85521 | Scavenger receptor cysteine-rich type 1 protein M130 OS=Bos taurus OX=9913 GN=CD163 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00530 | SRCR | Scavenger receptor cysteine-rich domain | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR001190 | Domain | SRCR domain | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR036772 | Homologous_superfamily | SRCR-like domain superfamily | Interproscan |
| IPR037524 | Domain | PA14/GLEYA domain | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR050686 | Family | SRCR-S1 Scavenger Receptor | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR006585 | Domain | Fucolectin tachylectin-4 pentraxin-1 | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR017448 | Domain | SRCR-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48071 | SRCR DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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