Genomic Location: chr1:31198166...31209531
NR annotation: XP_020626992.1, collagen alpha-1(V) chain-like [Orbicella faveolata]
| CDS |
| ACROYT_G002664 |
| Transcript |
| rna-ACROYT_G002664.t0 |
| Protein |
| KAL9988240.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR048287 | Domain | Thrombospondin-like, N-terminal domain | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
