Genomic Location: chr1:33280652...33355749
NR annotation: KAJ7339366.1, hypothetical protein OS493_005760 [Desmophyllum pertusum]
| CDS | |||||
| ACROYT_G002837 | |||||
| Transcript |
| rna-ACROYT_G002837.t0 |
| Protein |
| KAL9988399.1 |
| Uniprot term | Description |
|---|---|
| A0A0R4IBK5 | E3 ubiquitin-protein ligase rnf213-alpha OS=Danio rerio OX=7955 GN=rnf213a PE=3 SV=1 |
| E9Q555 | E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=3 |
| Q63HN8 | E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens OX=9606 GN=RNF213 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00667 | FAD_binding_1 | FAD binding domain | Domain | Interproscan |
| PF20173 | ZnF_RZ-type | RZ type zinc finger domain | Domain | Interproscan |
| PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003097 | Domain | Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR017927 | Domain | FAD-binding domain, ferredoxin reductase-type | Interproscan |
| IPR023173 | Homologous_superfamily | NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily | Interproscan |
| IPR039261 | Homologous_superfamily | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain | Interproscan |
| IPR046439 | Domain | Zinc finger, RZ-type | Interproscan |
| IPR017938 | Homologous_superfamily | Riboflavin synthase-like beta-barrel | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR031248 | Family | E3 ubiquitin-protein ligase RNF213 | Interproscan |
| IPR011704 | Domain | ATPase, dynein-related, AAA domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22605 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K22754 | RNF213; E3 ubiquitin-protein ligase RNF213 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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