Detailed information of KAL9988472.1 in Oculina patagonica

Genomic Location: chr1:34215854...34219751
NR annotation: XP_044168917.1, uncharacterized protein LOC114946821 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27502Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1
Q9QBZ5Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255) OX=388815 GN=gag-pol PE=3 SV=3
O93215Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) OX=388826 GN=gag-pol PE=3 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02899Phage_int_SAM_1Phage integrase, N-terminal SAM-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010998Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR044068DomainCore-binding (CB) domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR004107DomainIntegrase, SAM-like, N-terminalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35617PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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