Detailed information of KAL9989356.1 in Oculina patagonica

Genomic Location: chr1:45439481...45457344
NR annotation: XP_015764024.1, PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
Q923L3CUB and sushi domain-containing protein 1 OS=Mus musculus OX=10090 GN=Csmd1 PE=1 SV=2
F1RWC3Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431CUBCUB domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF16977ApeCC-terminal domain of apextrinFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR031569DomainApextrin, C-terminal domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19324PERFORIN-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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