Gene detail

Detailed information of KAM7429347.1 in Porites harrisoni

Genomic Location: Scaffold0584:221311...277915
NR annotation: no NCBI-NR hit recorded
Species abbreviation PHARR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-g20276.t2

GCGCGGGCTCGCACTTACAATATTGACTATATTCAACTGTAAAGCGAATGCGGAGGTAAATACCTTTCGTTTTTCGAGCAATATTTTAAGATACTGCGAGTGAAGAGTAGGGCGCCCTGCGACGTATTTTATCATCGGTTTGTTTCGATAGGACTTTACTTTGTCTTCACCATGGCTGATGAAGACCGTATGAGGTCAGAGATTGCAAGAATGCAAATGAGAGGAGATGAGCTGACTGATCAGAAGCAGAAGCTCAATGccgaatggaagaaaaaaagtaCGTCAAGGGAGGACGTTGTCGAAGTAATCAAGATCAGTgcaatttaagaaaaatgtgTTTACGTGGAGTTTAGAGAGTGACACACACAATACAGCTTGCTTATATTAGCAGATTTCTTAATTTTATTGAGACAGATTAGAATTGATCTGTCCTCTGACTGATAATGTTATTGAGATGTAACTGTATTAAAACTAGACTTTTTTCTAGTAATAATTGCAAATTAGGGGAGTGCGTTCCatggggagggggagggtggTGAGTAGTGAGCGGTAAAACTAGATTATTCTTACTGTTGCATCAGTAGGTATTGCACCTATAATGAAGTATCATGGATTATACAGTGTGTAATTATAACGTTGCCTAAAAGGCTGCTGCATTATTAAAGTTTTTCAGCAACAACTTGAAATTACAGTTTTACGAACACCAGACCTACGACACAGCCTGGACATTCTAATGTGGCTTGACAAAAAATATGGCTTGCTTTGTATATTCAGCCATTATCTGTTACATATATGTGGTTCAGTACAGATACTTTGCAGATATTTTCTACATATCTGTTAAATATCTGTGACCATCTTTGCAGATATTTTGCAGACATGGGTGAACTCATTACAGATAACTGCAGTACTGTAACAGATATGTGGCAGATAGTTGCAGATAGCTGACTTACTTGTTCGTTTGTCCCTGGAAAGTACGCGGCGTATGTTACAATTGGCAGAAGAGAGCCAGGAAGTCGGAATCAAAACGTTGGTGGCACTGGATGAACAAGGTGAACAGTTAGACAGGGTGGAAGAAAACTTGGATCAGATCAATGCTGACATGAAAGAAGCAGAAAGGAATTTGACAGCCCTAGAAAAGTGCTGTGGTTTGTGTGTCTGTCCTTGGAGAAGgcgaaaaaattttgaaaagacaGAGAACTACAAGAGAGCCTTTAAGAGTAATGATGATGGGGTTGTTTCAAGACAGCCTGGTGTGCGTTATCAGCAAGATGGAAATCGTGGAGAAACACCCAAAACAGGCTACATTCAAAAGATAACAGGAGATGCCAGGGAGGACGAAATGGATGAAAACCTTGGTCAGGTTTCAAACATTGTTGGCAACTTAAAATCTATGGCAATGGACATGGGGAAAGAGATTGACACACAGAACAGACAGCTGGATCGTATTAATGCAAAGACTGAAGCAAATGAAGCGCGAATTCAAGTGGCAAACTCGACAGCAAAGGATATCCTTAGAAACATCTAAACTGTACTCTTATATCATATCGTTGACTGTAACAGCGCTGAGTTCTCTTGTCCTGCATGGTTTGATATTAACACTACCTTCAATAAGGCTATCAATTGCTATTTTGTCAGATTAGATTAACGATgacgtaaaaaaataaattcttatAGACACCGAGATATATTTTCTTTACAAGAGATTTGATTTATTCATCCTAAGTCAGTAAGACTACAAGAATAAGACTAAAACAATAAGACTCCATAGACTCAAGAGAGGTAACGACAACTGAGTTTATGATTGAAATGTTAAAATATGCGTTGCCCATAGCGTGGAACTTATATTTTGACAGGTTGGAAAGCTGGTATTCAGCGATGGGCGAATAACTCATGAATTGGGTTTAAACGTGTCTTCTTTATACCCACAATGGCACTATGCAATTTTTAAGCTTCCGAAATGTGCATCTTCGTTTGTGGTAGCTTTGTCCTAATTATACGTAAGGTATAGCATGCACTAATTATTTTAACTGCTCCATTTAAGTTTTTTGTACGTTAGGTATCCCAAAGCAATGGCtgtaacattaattttctcaattgcaattgtcaataaataaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00835 all species →	SNAP-25	SNAP-25 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000928 all species →	Domain	SNAP-25 domain	Interproscan
IPR000727 all species →	Domain	Target SNARE coiled-coil homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19305 all species →	SYNAPTOSOMAL ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005484 all species →	Molecular Function	SNAP receptor activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0006906 all species →	Biological Process	vesicle fusion	Interproscan
GO:0016082 all species →	Biological Process	synaptic vesicle priming	Interproscan
GO:0019905 all species →	Molecular Function	syntaxin binding	Interproscan
GO:0031201 all species →	Cellular Component	SNARE complex	Interproscan
GO:0031629 all species →	Biological Process	synaptic vesicle fusion to presynaptic active zone membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAM7429347.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.