Gene detail

Detailed information of KAM7437234.1 in Porites harrisoni

Genomic Location: Scaffold0212:168848...189639
NR annotation: no NCBI-NR hit recorded
Species Porites harrisoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ABFA07_013063

ATGACCGCAAGGAGTGACAGCGGACATAAAGATGCTGGCGGTTCACAAAAGTTCGAGGAAACTCGTTCTGCACACACTAGTTTTGAAAAGAATGATGTGGGTAACAACCAATCTGCTGTAGAATCGCGTTCTAATGGAGACGAAAATCTTGCTGAAGGTACAAGTTTGGAAGTTGAAGAAGACCAGGAACCCGAAGAAGATGAGTTTGAAGAGATGATAGCTGAAGGACTGTCCCAGTTGGGAAGATCAGCTGATGGAACTCTTCAAGTTTATCTTAATCTCTTCCTTCCTGGATGTGGACTGACAGATATTATGTGCCTACAAGAATATGTTCACTTACAAACTGTAGTTCTTTCACACAATTCTCTTACAGATTTAAATCCATTAGGCAGCATGCCATATTTGGTATCACTTGATGTATCACACAATCAACTCAGCTCTGTTTTAGATTTCTCTCCTCCACTTGGTCTGAGGGAGGTGAACCTGTCTCACAACTGTATAGAGACACTTCCTGATCTTTCAGCTCATCATTGCTTGACAACTCTAAACCTGGACTCTAATTACATATCAGAGATCCAGGGTTTGTCTAACTGTTATCGTCTGTCACATCTGAGCCTAATGAATAACAAGATCACTCGAATTGCCAACCTTGACCATCTGCCTCTGAAATTTTTAAATCTGAGTAACAATAATATCAAGAAAATTGAAAATTTAGAAACGTTAAAATACCTAGAGGTTATTAATTTGTCAAGGAACAGTGTTAGAAGCATGAAAGGTCTTCAGAACCATAAATTACTACAAGAGATTGACCTGGAGGAAAACCAGATAATTGACATAGCTGAAGTGAGGTACATCAGAGAACTGAGTTTGCTGCGGAACCTGAATTTCCTTGATAACCCAATCCAGGGTATGCCAGACTACAGACTTTCCTTGTTATTTAGAATACAAAGTCTAACAGAGTTGGATCGCTCCAAAGTTTCAGTCGAAGAAAAGGTTGCAGCTGTCAACATGTTTAATCCTCCCCCAGAGGTCGTAGCAGCACGTGATCATATGTTTCACGTGACCAAGTCTCTTCTCCAGGCCACAAGAATTCATGACAGTACCCTCCCGAGTGTGGATACACCATATCCTATGTTAATCTTGTGCGGTCCCCCCGGGTCTGGCAAACGATATCTGGCAAGAAGACTTTGTCAAGAGTTTCCAGACTTCTTCGGCTTTGGCATCTGTCACACGACAAGATCGCCTCGTACCAAGGAAGAAAATCTTGAAGATTATTTTTTCGTAACGCAAGAAGAATTTGAACAAGGGGTAGTGATGGGCAAGTTCCTTCAGACTTGCCAGCTAGCGGGAAACTGGTACGGAGTCACGAGAGAGGCCGTGGAAAATGTGGCCCGCGAGGGACTTGCTGCAGTGTTTCATATGGACTTACAGGGGGTCTTGAGTTTCAAGAACACCTATTTTGAACCAAGATATGTTTTGGTGGTTCCTGTATCAAAGGAGATTCATGTCACCCGCCTCCGTGAACGCGGTGATTATGCAGAGCCTATGTTACTCCAATCATTAGAGCGAGCTGATGCGTGCCTACACCACAACAGAGATAATCCTGGTTTCTTTGACATGGCAATAAGCAGCGATGATCTTAGCGACGCTTATAAGCGTCTTAAACGCCTTATTATGGAATACTTGGGCATGTCACCTCCGTCAACAGTGCATTCCGATCTGTTCAGCGGTAGCATGACATCGGTTGATACCAGCCAATCAGAAGACACATTACATCAAGCTGATAAATCTGGTACCAGTCAAACTACAAGTATCACGGTCAACATGGCAGCGAGAACCTGGTCACGTCCATCCGACTCCTCCACCCTACCCTCCAAGGGCATTAAATTGAAGCAGCACAGGACACCAGTGGAAATCTTGTCACTTGAGCGTCGACAGACCAAAGCCAAGGCGGCAGTGGCGGGAATTCATCAGGTTTCACTGGAGCAATTTATGACTTCAAGACACGCAGTTTCAGCCAGTTTCCAGCCATCAACAGCGCACTTTTCCTCCTCCGGGGTCAAACGCTCCACATCAGAACCTCTCAATTTCAACCCCTCATTGGCCTCCATGGTCGCAAACGCCAGCAGTCAAAATGAGGCGAGAGAAGCGGGCCTGGAATCGAACATCTCTGAATCGGACGAGGATCAGGAATCCGCTTCATCCATCATATCTTCTGCGCGTGCGTACTCTGATAACGGAGTCCAGTCTCCAAGAGACTCGGACGAGCAAGAAGGGGAAGACTCGAGAGACTTGCTGGATTTCATTCCAACGGAGACACTCGACTCGCAAGAAACCGCTTCTGCTCCTTTCTCGGGTGTTTTTGGTCAAGTAGAAATTGCCAATTCTATATAA

Transcript

rna-g13384.t1

caaaatggcggacaacaCATAAGATTGTACCCACAAACAAACTGGTCGCGTTTAACTTTTTTGCTTGCCTCTAATCCGGAATAAAATGACCGCAAGGAGTGACAGCGGACATAAAGATGCTGGCGGTTCACAAAAGTTCGAGGAAACTCGTTCTGCACACACTAGTTTTGAAAAGAATGATGTGGGTAACAACCAATCTGCTGTAGAATCGCGTTCTAATGGAGACGAAAATCTTGCTGAAGGTACAAGTTTGGAAGTTGAAGAAGACCAGGAACCCGAAGAAGATGAGTTTGAAGAGATGATAGCTGAAGGACTGTCCCAGTTGGGAAGATCAGCTGATGGAACTCTTCAAGTTTATCTTAATCTCTTCCTTCCTGGATGTGGACTGACAGATATTATGTGCCTACAAGAATATGTTCACTTACAAACTGTAGTTCTTTCACACAATTCTCTTACAGATTTAAATCCATTAGGCAGCATGCCATATTTGGTATCACTTGATGTATCACACAATCAACTCAGCTCTGTTTTAGATTTCTCTCCTCCACTTGGTCTGAGGGAGGTGAACCTGTCTCACAACTGTATAGAGACACTTCCTGATCTTTCAGCTCATCATTGCTTGACAACTCTAAACCTGGACTCTAATTACATATCAGAGATCCAGGGTTTGTCTAACTGTTATCGTCTGTCACATCTGAGCCTAATGAATAACAAGATCACTCGAATTGCCAACCTTGACCATCTGCctctgaaatttttaaatctgaGTAACAATAATAtcaagaaaattgaaaatttagaAACGTTAAAATACCTAGAGGTTATTAATTTGTCAAGGAACAGTGTTAGAAGCATGAAAGGTCTTCAGAACCATAAATTACTACAAGAGATTGACCTGGAGGAAAACCAGATAATTGACATAGCTGAAGTGAGGTACATCAGAGAACTGAGTTTGCTGCGGAACCTGAATTTCCTTGATAACCCAATCCAGGGTATGCCAGACTACAGACTTTCCTTGTTATTTAGAATACAAAGTCTAACAGAGTTGGATCGCTCCAAAGTTTCAGTCGAAGAAAAGGTTGCAGCTGTCAACATGTTTAATCCTCCCCCAGAGGTCGTAGCAGCACGTGATCATATGTTTCACGTGACCAAGTCTCTTCTCCAGGCCACAAGAATTCATGACAGTACCCTCCCGAGTGTGGATACACCATATCCTATGTTAATCTTGTGCGGTCCCCCCGGGTCTGGCAAACGATATCTGGCAAGAAGACTTTGTCAAGAGTTTCCAGACTTCTTCGGCTTTGGCATCTGTCACACGACAAGATCGCCTCGTACCAAGGAAGAAAATCttgaagattattttttcgTAACGCAAGAAGAATTTGAACAAGGGGTAGTGATGGGCAAGTTCCTTCAGACTTGCCAGCTAGCGGGAAACTGGTACGGAGTCACGAGAGAGGCCGTGGAAAATGTGGCCCGCGAGGGACTTGCTGCAGTGTTTCATATGGACTTAcagGGGGTCTTGAGTTTCAAGAACACCTATTTTGAACCAAGATATGTTTTGGTGGTTCCTGTATCAAAGGAGATTCATGTCACCCGCCTCCGTGAACGCGGTGATTATGCAGAGCCTATGTTACTCCAATCATTAGAGCGAGCTGATGCGTGCCTACACCACAACAGAGATAATCCTGGTTTCTTTGACATGGCAATAAGCAGCGATGATCTTAGCGACGCTTATAAGCGTCTTAAACGCCTTATTATGGAATACTTGGGCATGTCACCTCCGTCAACAGTGCATTCCGATCTGTTCAGCGGTAGCATGACATCGGTTGATaccagccaatcagaagacaCATTACATCAAGCTGATAAATCTGGTACCAGTCAAACTACAAGTATCACGGTCAACATGGCAGCGAGAACCTGGTCACGTCCATCCGACTCCTCCACCCTACCCTCCAAGGGCATTAAATTGAAGCAGCACAGGACACCAGTGGAAATCTTGTCACTTGAGCGTCGACAGACCAAAGCCAAGGCGGCAGTGGCGGGAATTCATCAGGTTTCACTGGAGCAATTTATGACTTCAAGACACGCAGTTTCAGCCAGTTTCCAGCCATCAACAGCGCACTTTTCCTCCTCCGGGGTCAAACGCTCCACATCAGAACCTCTCAATTTCAACccctcattggcctccatggtCGCAAACGCCAGCAGTCAAAATGAGGCGAGAGAAGCGGGCCTGGAATCGAACATCTCTGAATCGGACGAGGATCAGGAATCCGCTTCATCCATCATATCTTCTGCGCGTGCGTACTCTGATAACGGAGTCCAGTCTCCAAGAGACTCGGACGAGCAAGAAGGGGAAGACTCGAGAGACTTGCTGGATTTCATTCCAACGGAGACACTCGACTCGCAAGAAACCGCTTCTGCTCCTTTCTCGGGTGTTTTTGGTCAAGTAGAAATTGCCAATTCTATATAACAGTTTGATTTCTTATAATGCCTCAGAAGAAAGACACTTATAATTTCCACGtgagaaaaaattaaactcaCGAGCAGCAATACTTGAGTTGAAGATACCACTTTCCTATCGTTTGAGTGATCAATCCATCTTTTGGAATTGAATCATGTGACTTAGTAAAATTTGATTCATAAAGTGAAAGAACTGTAAAATTTTACAGCCGAGTAAACTCGTGAAATGCAAAAATATAGTTTACTAGAAGCGTGCATGCTGAAAGCCAACGTTGTACATacgtgttttttcttttcctcgatatattttctgtttttgtaaATAGTTATTTAAGGTCTTTGTCCAGCTTTACAGGATATGAAGGCTCTCTTGCCCTTTTTCCCCTCTCCCCAGTCTCCTATGGGCACAATACCAGGCCCATTTCTTGACGAtataaataaaaacagaaattgCACTATTTTGTTTAACTGCTGCGTCTCCCTGATACTTTCTATTACTAGAGTAATGTCACCAGAAAATTCACGTCACTTTTCTTGTTCGACCCAAATAATGTATTCCTTAGCCagccttttttgttattttgttttgtttttgtttttgttgtaaccTAAAATTAATCGTTGGAACTTTTGGCGGGCAAATTTCCTTTTgacgttttattttctttattggaAATTGGGTTCTCCTTTTCATACCGAAGTAAAACGTGACAGACAAGTTTAGTAATAAATATTAGCGTGACACTTTGACCTAAAAAATATATGGAATAGAATCAAGAAGTTTGAATTTTTAGCATTTTAACAGACAAGTGAACAGCGTATGGGCTATTACTACTCTTTCTaggagtaaaaaaaaacacccgATTGATTATTTAATATATTGGGTTTACTgaactttttttaattcagcAAAGCGTTGCTCATCATAGGGGCAAGGTGGCAGACCGTTTTTATTgcttattattatattttatcaaCCCGTCAGCTTCTTTTCACGTATGATTTTTAAATAAACGCACATTGTCACCGTTATATTGTTTCTTTGCTTTGCATGCCTTAATTAAATCTCAAACCACTCCACCTTTGTACATATCAATTAAAAGAACAGTCCTGgattttaatatttattcacCGGAACCATGGTAACATACCTTGGCTTCCAAAGTGACTCTTCACAGCAATTAGAAGTACCTAAATTTTAATATTCACTATTATCAATGTTATAAGGAGAAAGTCGTAAATATTTTGGACTTTTCTCAGGAAGCGAAgcactgaaaaatattttttggaatatttgaCGCAATCGATGCTCGCGCTAAAGAACCTATGACTCAACAAACGGATCTCTACTTCTTCGATCAATGTTTCAGACGTCGAAAATACAAGCGCTATCGAAAACCTCAAGACCTGTTACCGTTTTCATTACGGCTCACGGGACTTAGTGGAGCTGTTAAAGTCGAAGCCtatcttaaacaacaacaacaaaaagttgGAGAAGGAAAAGAAGGTTATAATAAGGTTTCTGTGGCCGAGAAAGACAATGAAGCTGAGTCGCCATCTCGTGCAGGCCTGATTCGTAAGGATCAAGATGTTGAATTTGAAGGTGTAAAAAAATTTCACGGTGGAAAACCGTTTAACTTACCGGATATTGCAGCTCGTGGTGTTCATTCACCACCAGCCATAAGGAGCTATGAGCAGTTAGAGGGAGACGACGAGGAGGAGGATACACAGAGGTTCTTGTTCGAGGAAAATAAATTCGCGGCTCCGAATCTGTTAGCGCAACTTGGACGATTAATTGATCACATACACGAGGTACAGTTGGAAGAATTAAAAGAGGTTCAGTCTAGTAGTGGTCACTTTAATAGCAGATCTGCGACACCCGTGCCCGAGGAAGAACAAAGTTTAATCTCTGAAACTATTCGCAGTGGAGGCGTCTTTATCCCGCTACCAGACGATTTGCATAAGAAGCTTCGAGGAAACTTCGAAGAACTATCCGCCAATGTTGTGTATGTTCGCCGAGAATGGCAAACTACAAGTTATAGAGAGCAGGCACTTTTAAAGAAACGATTGGGTATCATGAGTGACTCACAAACGAATGTAGATGTGGCTAAGAGTCCTGATAAAAGTACAATATCAGGAGAGCAAATCAAAACAAATGATGATATTAAGGTATCTGCACCTAAAGGATCCGAGTCAAAAGATTTCACTAAACGAAAACAATCAACTGTCGGTGAGTCTACTTCAAAGATCGATTCTACCGATGATCACAGGAGAGAATCGCTTCTTGGTGTAAATACTCCAGACCTTAGTACGAGTCATACTGAGTTTCCAAGCCGTCGTGAATCATCATCGCGACTTTCGTTCATTACAAGTCGTCCTAAGACTCGGTTAGAGAGGTTCAAGGTATTTACGGATAAGGTTTCAGCTGAGAAAAGAAGAACTGCAAGTGGAAGTCACTTTGACGAGGATGAAGAAAATCAAAAAGATTTATCAGATGtccattctGGTCATGGTACCTCAGGGCAGCCAACTGTTATTAACTTCTCTCTACTCTCAAAAACCTGTGAGGAAAAAGGTTGGATTCTGCATCAAGATAGTGCAAGCGACCTTGAAAGACAAACATTGTTAGAATGGGCGCGAGCTAGGCTACAGCAAGCTATAAGAGAAAAGGAAGAGATGAATGAGAAAGCAAAGGAACTTGGTGTAGATGGCCCTCTAGTTACTAAATACTATGGAGACACTCAGAGGGAAGCTGCTATGAAGTACAAGAAGGGTGTGTCATGGGCCAAAAGGTGGAAGAACCTCTCAGATGAGGACAAGAGACCAAAGTTTCTCACCAGCTTACCAGATGGCACCTCTTATTGCTACTACCCTTCTGGCCGAGTGGCTATATGTGCCATATACCCTGGTCCTAACATTGCTGGGAGATACACTATAGTATATGGAGACTCTGTTGACAATCCAATGTTAGCTATTTTTGTTCCAGCAGGACAAGGCTGCTGTTTCCACAAGAATGGAAGCATCAGATTTGTTTCAACCACTAAATTTGGAGCTGTCATGGAGGATGATGGCAAAGTGGAACAGAAGTGGAAATGGCCTCTTGGAAGACTTCAAACAACTGTTGTAGTACAGCTGAATAACTTCATATCTCTCCGTTGCGTCAGCCAAATCGGGATAACACTGTACTTCAACTGTCAGAATGAGACAACTAAGTTTCCCGTTGGAATGGCACAAGGAGCAAAACCAGTTAAACTAACAGAGTTGGGTTATCTCCAGACATCTACGAAATTTTCTTCAAATGCAGCGCTACAGTCAATGAAGCCAAAAGTGAAGAAacgagaagagaagagaaggcgGCGGACGCAGAAACTGAAACATATAGAAACCATTTCTGAGGAGTTGCTTGAACAGCGCTTACAGGAGTTAGAGGAGAAATTTCCTGAGAGAAAAGAGTTGGATTTGGATGCGCCGTGGCAGATGGATCTTTTAAAACTGCAACGTAAAGTCAAGGGTTTGATCTATGACTGGATGGAACATTACCGAGTCGCTGTCGGTATATCTCCCCCTTTCCGCATCTCGTCTCGTGCTAAGCGTCGCTCCAAGTCTCACTCTGCTCGATCCATGCCCGGTGCCCTTCCTTCCGCGGTCCAGGCAGCAAAGAGCATTTTTCGGCGATCTCCGTCGGCCCCTCCTGTGTCTCATCGTCAGGGAACATCTCGGGACCGTCCAAGTGTACAGTTTGGTATTCGTCCGCATAGCTCCGCGGAGAAAGCAAAGATTGGAGTAAGAGGAGAAGATATCAACAGTATTACAATTGAAGTACCCACTGGTGAGATGCTGGGATCAAGAATTGCTAGTAAAGCCACCTCAGCAATATCTGGCTATAGTCCAACAGTGGCCAACTCACGGACACCATTCCGCTGTGGGGTGATACAGCAGGCACGTGCTTCCACGCCTCCCAGGTGTGGTTGCCCTGTCGCTCTGAGAGCTGAGATGAGGGGAGAAAAGGATCCTCAATGCAGATGTGATCGTCGTAAAATCCCGCTTGTCACGGACCTAGAATACGATGCATTTATTACCGACCATGTTCCTCGCACGCAGCTCCTCGTGGTCAGCGTCACTTCATCACTCTATCCTGATGCAAACCCCTGTGACAGTATGCTGGATCAACTATTTCATGAAAAGAACCGCAATCGATCTCTGCCTTGCGTTCAGGCCCAAAATGATCCATTCCGCTTGGTGCGTTACGACATCTCGTCAGCCTCACTTGGATGTACTGATCAGTCCCAGCCCCTACTCCTCAGAAGACATAACGCTGTACCAGGATTGTTTTTGATGTACACCGGGGGTAGGCTTCTGTTTGCTGATCATATATTCAACGGCTATGGAAATGCTAAGAAAGATTTTCTCAAACAGATCATGAGGTCAAGAAAAGACGCTTTGGAAGGAAAATCTCTCCCATCAGACTTCCGCCTGAGCCCTACGCGCGGTCGATCCGGACCGAGAGCAGCCTGGGGTGGAGAAATAGGTGGTGTGAAGATCACACAGCGTGCATTACCCAAAAGTCCACTAGTAGGTGAAGTTGAAGTCTTTCAGAGTGGTACAAGACTCGATTCTGCCAATACTGTTGGGTCTCTAAGCTCTGCTTCGATTGAAATCAGGGGTGGTAGTAGTTCTGCTGCGAGTTTTGTTAATCTTGGTTTGTCAATTGACTCTCCATTTCCTATGCACACAAGAAAATGGGTGGCATCGAACGAGACAATTCCCGAGCATCGGAGAGTGCAAACATCGGCGTGGTAACGAGGGCTGACAGAAcgaaaatttaaagaaataaataaaaatttaaagagaaagataaagataaagaaaattaaatcttATTTATGTCTGCTAGACGTGGACTATTGCAATAAAGAGAAAGATATTTTCTTCTTGTATTTAAATCAAAAGAATTTTCTTCGTTttttagctttctttttttgaaatcaaaaaAGTGTTTAAATCAAACTCTTTGCCGACTGAACAGGCAGAGAAACCTTTTTTATCACGTGACACCCTTCAATATCTGTaatatatttataaaactacAATAAAGTAGATTGTTTTCTTGATAAGCGTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00625 all species →	Guanylate_kin	Guanylate kinase	Domain	Interproscan
PF14580 all species →	LRR_9	Leucine-rich repeat	Repeat	Interproscan
PF12799 all species →	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008145 all species →	Domain	Guanylate kinase/L-type calcium channel beta subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR008144 all species →	Domain	Guanylate kinase-like domain	Interproscan
IPR025875 all species →	Repeat	Leucine rich repeat 4	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23117 all species →	GUANYLATE KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004385 all species →	Molecular Function	guanylate kinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25549	LRGUK; leucine-rich repeat and guanylate kinase domain-containing protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.