Gene detail

Detailed information of KAM7440506.1 in Porites harrisoni

Genomic Location: Scaffold0140:780456...805883
NR annotation: no NCBI-NR hit recorded
Species Porites harrisoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ABFA07_010329

ATGAGGTCTTCTGACGTCATTACTACCTTAATATTATGTTTGTTGGTTTGCAGTGCTACAAGCGAGGAAGATCTAGACCTGAAGTCGATTTTGAGTCACCTGAAGAAAATGTGTCTAGAAAACCCAGATAACAAAATTAACGACTCAGATGTCAAGGTCAAGTGTAAGTTAACTTTTGACATCACTTGCTGGAAAGAAACACGGGCAGGTGAAACTTTTATACAACCTTGCCCTTTCCTCTTTTATTCGACAAAAGACAACGTTTCCCGTCGATGCGATGAGCAAGGAAAATGGCAAAGAATTAACATCACGAACTGTCACAGACTGAAACCAAAAGAGGCTGTTGATACAGGGAAAAGGATCCAGTCTAACATAACCATAATAGATAAAAAGGATGATTCTCATGAGGATCGTGTAAAGAAAGTTTTCGTCGCTATCAGCTGGATGGCATTTTTTGTTCTTCTTCCTACTTTCGTAATTATATGCATTGTAATGAGAAAGAATGCCCGGTTCACTTTACACAAGAATTTAATCCTCGCTTTTATTCTACGCACCATCACATTATTTATTCATTACTATGGAAACATGGGAGACAAGAGCTACAATAAGACGGTTTGCAACGTATTCTGGGTATTGAACCGCTACTTTGCAGCTTCAGAAATCACGTGGATCCTAAATGAAGGAATTTTTCTATTACGCATGCTTGTGTATCCCTTCGACAACGAGTCTTATTTCTTGTACTACTTTGTCTTCGGATGGGGTTTTTCCGGCGTGTTGTTGTTCTGTGTCTACCTTCCCTATTTTCAGTTCACAGTTGCAAGAAATAGCGAAAGATGCTGGGTGACTCTTAGTCATAGCTCTCACATGTTAGTGTTGTATATTCCGCTGACCATTATGTTAGTGATTAATTTTGGAATTGCAGCATATGTTGTGCAGATGCTCACGAAAAAACTCAAACACTCCCACTCGTCGCACATGAACTTAGTAAAAAAAAGCGCCAAAGCCGTGGTGATTCTAATCTCTCTCCTAGGATTAATCTATCTCCTAATTTTCTATCTGCCATCAAACAGCGGCGCTGAAAATTATTTTATCGCTGTCGCTTATCCGCTCCAGGGCATAATGGTTTGTATATTTTGTGTTTATCTGAGTGTGGAGTTCCGTGAATCTTTCAGAAGGTACTGGATGAAATGGAGATACGGAATCCTAATAGAGACGAACCCGTACTCCGCTGCAGCACAAGACATTGAACCGGGTCCTTCCGGTGAACAAGGAACTTCAGCAACGGTGCTAGGAACGGAGCAATCAGAGGAGACACGTCTCTCAGCCCCCTCAATTCGGTCCCTTCAAGAATCATCAAGGACTGAATTATCCAAGATACCTCCTCAAAAACCAAAGAAACGGTCGTCACAGATGTCGCTTATCTCACGTTCAAGTGATCTTACAAAATTTCGCCTAAAAAAAGTTGAACCAGAGCCCTTAAAACCCTTGCGAGTACAGTCAGTGGGTCCAGAGGCCTGGTGCCCACCATCGCTTCAAGATGAGGCAGTTGCCTGGGGAGAGATACATTCTTTAGAGAATCAAGAAAAATCTAGTGTCAATCAAGGTTTCTCCGCAAAAAGTGAGGCAGACCTGTCCCATTTTGGAAGTCAAATTTCTCTTGAACCTAAAACATCTTCTCAACTACATCTTGAGTCAAAGGGGAGAGGTTCTGTAAAGCAGGAAAAAAATGTGAAAGATAAGTCAGCGTGGAACTTATCTGAGGAATTCCCTTTTTCGAGTCAGTTGTTTGAGCGAGAAATACGGCCGTCAGGAGCGAGAGATTGTGAAGATCAGAAAAAAGATGTGAAAGATGAGTCAGTATGGAGCTTTTCAGAGGAATCTCCTTTTTCGAGTCAGTTGTTTGAGCGTCAAATGCGGCCATCAACTGACGAGCGCTTAAGCGACCTCGCAGGCGCAAACGCGCTTCGGGATGCTGAAACACGGGCAGTGAGAGCAGGTTCTTCGAATTCCAAACATGATTTCTCTTTGTCAAGTCAACTCTTTGAACATGACACAGACTTCTCAACTGCTGAAAAAGAGTCTGGTGGCAAAACGTTTGAAACAGTGACAGAAGGCTCAAGTTTATACCAAGACATTGAGCCGTCGACGAGCACTGGCGATTCCAGCGTTTCTTCTCGAAGAAAACAGTTTTGGGAAAAGGCTCGAAAGCTGGCGTCTAACAGAAGGAGATCAATGCTTGAGGGCGGACGGGTGGTTTCAAAAGAAGATGAATCATTACCTGCTCATCAAAAGTATGCCGCAAAACAGAAAGATGCTGATTCGTACAAACTGGCATGGATCGCTGGTATCCTCAGAGGAGATAGATCACGTGAGAACGAGAGTGATGCATGA

Transcript

rna-g10590.t1

ATGAGGTCTTCTGACGTCATTACTACCTTAATATTATGTTTGTTGGTTTGCAGTGCTACAAGCGAGGAAGATCTAGACCTGAAGTCGATTTTGAGTCACCTGAAGAAAATGTGTCTAGAAAACCCAGATAACAAAATTAACGACTCAGatgTCAAGGTCAAGTGTAAGTTAACTTTTGACATCACTTGCTGGAAAGAAACACGGGCAGGTGAAACTTTTATACAACCTTGCCCTTTCCTCTTTTATTCGACAAAAGACAACGTTTCCCGTCGATGCGATGAGCAAGGAAAATGGCAAAGAATTAACATCACGAACTGTCACAGACTGAAACCAAAAGAGGCTGTTGATACAGGGAAAAGGATCCAGTCTAACATAACCATAATAGATAAAAAGGATGATTCTCATGAGGATCGTGTAAAGAAAGTTTTCGTCGCTATCAGCTGGATGgcattttttgttcttcttccTACTTTCGTAATTATATGCATTGTAATGAGAAAGAATGCCCGGTTCACTTTACACAAGAATTTAATCCTCGCTTTTATTCTACGCACCATcacattatttattcattactATGGAAACATGGGAGACAAGAGCTACAATAAGaCGGTTTGCAACGTATTCTGGGTATTGAACCGCTACTTTGCAGCTTCAGAAATCACGTGGATCCTAAATGAAGGAATTTTTCTATTACGCATGCTTGTGTATCCCTTCGACAACGAGTCTTATTTCTTGTACTACTTTGTCTTCGGATGGGGTTTTTCCGGCGTGTTGTTGTTCTGTGTCTACCTTCCCTATTTTCAGTTCACAGTTGCAAGAAATAGCGAAAGatgCTGGGTGACTCTTAGTCATAGCTCTCACATGTTAGTGTTGTATATTCCGCTGACCATTATGTTAGTGATTAATTTTGGAATTGCAGCATATGTTGTGCAGATGCTCACGAAAAAACTCAAACACTCCCACTCGTCGCACATGAACTTAGTAAAAAAAAGCGCCAAAGCCGTGGTGATTCTAATCTCTCTCCTAGGATTAATCTATCTCCTAATTTTCTATCTGCCATCAAACAGCGGCGCTGAAAATTATTTTATCGCTGTCGCTTATCCGCTCCAGgGCATAATGGTTTGTATATTTTGTGTTTATCTGAGTGTGGAGTTCCGTGAATCTTTCAGAAGGTACTGGATGAAATGGAGATACGGAATCCTAATAGAGACGAACCCGTACTCCGCTGCAGCACAAGACATTGAACCGGGTCCTTCCGGTGAACAAGGAACTTCAGCAACGGTGCTAGGAACGGAGCAATCAGAGGAGACACGTCTCTCAGCCCCCTCAATTCGGTCCCTTCAAGAATCATCAAGGACTGAATTATCCAAGATACCTCCTCAAAAACCAAAGAAACGGTCGTCACAGATGTCGCTTATCTCACGTTCAAGTGATCTTACAAAATTTCGCCTAAAAAAAGTTGAACCAGAGCCCTTAAAACCCTTGCGAGTACAGTCAGTGGGTCCAGAGGCCTGGTGCCCACCATCGCTTCAAGATGAGGCAGTTGCCTGGGGAGAGATACATTCTTTAGAGAATCAAGAAAAATCTAGTGTCAATCAAGGTTTCTCCGCAAAAAGTGAGGCAGACCTGTCCCATTTTGGAAGTCAAATTTCTCTTGAACCTAAAACATCTTCTCAACTACATCTTGAGTCAAAGGGGAGAGGTTCTGTAAAGCAGgaaaaaaatgtgaaagatAAGTCAGCGTGGAACTTATCTGAGGAATTCCCTTTTTCGAGTCAGTTGTTTGAGCGAGAAATACGGCCGTCAGGAGCGAGAGATTGTGAAGATCAGAAAAAAGATGTGAAAGATGAGTCAGTATGGAGCTTTTCAGAGGAATCTCCTTTTTCGAGTCAGTTGTTTGAGCGTCAAATGCGGCCATCAACTGACGAGCGCTTAAGCGACCTCGCAGGCGCAAACGCGCTTCGGGATGCTGAAACACGGGCAGTGAGAGCAGGTTCTTCGAATTCCAAACATGATTTCTCTTTGTCAAGTCAACTCTTTGAACATGACACAGACTTCTCAACTGCTGAAAAAGAGTCTGGTGGCAAAACGTTTGAAACAGTGACAGAAGGCTCAAGTTTATACCAAGACATTGAGCCGTCGACGAGCACTGGCGATTCCAGCGTTTCTTCTCGAAGAAAACAGTTTTGGGAAAAGGCTCGAAAGCTGGCGTCTAACAGAAGGAGATCAATGCTTGAGGGCGGACGGGTGGTTTCAAAAGAAGATGAATCATTACCTGCTCATCAAAAGTATGCCGCAAAACAGAAAGATGCTGATTCGTACAAACTGGCATGGATCGCTGGTATCCTCAGAGGAGATAGATCACGTGAGAACGAGAGTGATGCATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR050332 all species →	Family	G-protein coupled receptor 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45620 all species →	PDF RECEPTOR-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007188 all species →	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAM7440506.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.