Gene detail

Detailed information of KAM7443003.1 in Porites harrisoni

Genomic Location: Scaffold0092:100574...125938
NR annotation: no NCBI-NR hit recorded
Species Porites harrisoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ABFA07_008097

ATGGCTTCCCGCCATGTCGACGTGAACGAGCGTCGACTTCGGCCTGTTTATGATGCTTTGGATAGCATGAACAATAAACAGGCCATCCAACTTGCTGACAAAATCCTGAAGAAACAGAAGGACTTGCATTGTGCTAAGGCTTTAAAGGGACTAGCCTTACTACGATCAGGCAAGAATGCAGAGAGCGAGGCATTGATGGCAGAGGTAATGGAAGCTAAACCAGCTGATGACCCCACGTTACAAGCAATGACAATCTGCTTCAGGGAGATGCAAAAACCTGAGATGATTCCTCATGTTTATGAGATGGCTCTAAAACAGAATCCACAGAGTGAAGAGCTATATTCCCATCTTTTCATGGCATATGTCAGAATAGGAGATTACAAGAAACAGCAGCAGGCTGCAATGAATCTATATAAGCAGTTTTCAAAGAATCCTTATTACTTTTGGGCAGTCATGAGTATTATGATGCAGGGATTAATGGCTGCTGATGAGAAGTTAGGTAAAACTATGTTCTTTCCTTTGGCTGAAAGAATGGTTATCAAGTTTATCAATGAAAACAAAGTTGATGCTGAAGCAGAGGTTCGACTTTATTTAATGATTTTAGAGAAGCTAGAGCTCTATGATAAGGCCCTGGATATACTTAGAAAAAGTAATTTAGCAGTTAAATTAATTAGTTACATGGATGAGAAAGAAGAGAAAGAAGCCTGTTACCTAATGAAGCTGTGCAGATGGCATGAAGCCAACCTGACATTTAAGAAGCTGATTTTGAAGAGCCCGGATCAGTGGTCATACTATCAGTTGTACTTCACTTCAGCTTTCTCTCTCGTGAAAGAGGAATGGAAACCAGTGGATGAGTCAGAGGAGGTTCCTGATCATACTTTAGAACATATCTACAAATTCATTGCATCCCTCATTGAAAGTGAACAACCAAAGGAGAAGCGGGCCTGTAGAGGGCCATTTTTAGCACAGCTGGAACTGGGAAAGCTTTGTAAACAACAATGTATATACTCTGACTCTAGACTAAATTCCAATTCCATGGTAGATTTATTAGTAGAATATTTTAAGCGGTTTGGAGACAAATCCTGCTGTTTTTCCGACCTGTCACCTTATTTGCACTTGAACCTGGAAGAGCAGTCTGAAAAGAGAAAGTTTATTGAAGTGTTGAAATCAACTCTGCCATCTGTTGACAGTGAAGATTCAGATTCATCTCAAATTAAACTTATGCACAGGAGGCTCACAATTGAGCAATTTTCCAGACATTTAGGATTTCATTGTTCCCTTTCTTCTGATGAAAAGATTGCTCTTTCAAAGGAATACATGAAGCAACACAAAGATGGTTTGGTTTATGGTAAAGATCTGTTGCCTACAGAACTCCAGTACAGTGATGGGTTTGCACAGCTTGCCGTGCATCTGATGTTAGATGTAAATGATGAGAAAGGAAGCTCAGAAATGAACTGGCATCTTCTTATCATGCTGGAGAGTGCACTAAAAGCGAGTCCTTCTAATCACCATCTCAAGTTATTATTAATGAAGGTTTATTGTTCAATGGGTGCTTTTGGTCCTTGTTTAGTGGTTTTTGATGGATTGGAGATCAAACACATTGAACAAGATATTCTTGGGTACACTGTGACACAGTATGTTGAAGCTCTTGGTCACTTTGAGGCAGCTTCATCCATGTACTTAAACACATTAAAATTCTTTTATGGAAATCAGAAGAGTACACCAGAACATATCATTGCTGCATACAAGTATGGGTCATTTGAAAAGATTCCTGAATTTATTGAGCTCAAGAAGAGGCTTGATTGCTCTCTACATTTTGCCAGTGTCAATTATGAAAACATGGTATTAGATGCTTTTCTCAAGGCAAACAGTCTTGCAGATGCTCAAAGTCATTTTACTGAGAGTAACCTCCTGGACAAGTGCACTGTAGCTAAAGACTGGATGATGGATCTGAGGGACAACAGAGATCTGAGAATACTTGAGACATGGGATCTTCCAGAGAGACAGCTTACAAAGGACCAAGAGCTGAGGTGTATGGAACAAGAGGTTCTGTGGTTAAGACTCAGACTCCTTGTCCTGAGGGGCCTGGCACTATCTGTTTCCTTAGTTCCCAAGCCTCCTCAGAATATGCAAGCCATGAACAATGGTACAGCTGAACCTGTGTTCCCTTTGGAACAAGTCATCACTGAACTAACAGAGGTTTTACAGGAGATTGAAAAACATCCAGGCACAAGAGAAAAGCTTCCTCTGCTTGGTCCTCCATGTTCAAGACTAGCAAGGTTTATTGATGGACATCATGGAACGGTAATGGTTGCCATGTTAAGGGTGTGTCATGAGGCCCATCATCTTCATTATGGGGCACAAGATTCCAATGCAAAGGATCACTGGAATAACATTCAAGAAAATTTAGAGGAGGTGTCAAGAATTCTGAAAGACTCCACTGCAAAATGTTCAGCTATGCTCACAATAGGCAGTGAGGGGAAGACAATGTTCAATGGATATGTGTTGGAACCTTTGGTCCTTCTAGTAGAGAGCTACTGTTGCATTGTCTTGTTAGCAGCTGTGAGCTGTAGATTTCTCCAAAAACTTGCAGGTAGCAAAAAAGCCAAGAAAAAGAAACCTGTACCTGCACAAACAAATGAGGAAACTGGTCCATTCAAGGCATTCCTATCTACTCTGCAGTCTAACATTTCTGCTCTTCATGCATCACTTGTGGAAGTGAATGTTGCACAGTTATCTGACGATCTCTTGGAACTAAATTTAGTTGAGCTCGACAATGAGACCAAGTCTTCTATTGTGTCGGAGATTTGGGAGAAGTTACAGACCAGTTACAAGCAGTCAGTGAAGGAGATTTCAGAACTTTTACATCATAAAGTCAAATTTGCCAAATCTCTTCAAATATGA

Transcript

rna-g8310.t1

AGCATGTGAGCCGAAAATTCAACATGGCTTCCCGCCATGTCGACGTGAACGAGCGTCGACTTCGGCCTGTTTATGATGCTTTGGATAGCATGAACAATAAACAGGCCATCCAACTTGCTGACAAAATCCTGAAGAAACAGAAGGACTTGCATTGTGCTAAGGCTTTAAAGGGACTAGCCTTACTACGATCAGGCAAGAATGCAGAGAGCGAGGCATTGATGGCAGAGGTAATGGAAGCTAAACCAGCTGATGACCCCACGTTACAAGCAATGACAATCTGCTTCAGGGAGATGCAAAAACCTGAGATGATTCCTCATGTTTATGAGATGGCTCTAAAACAGAATCCACAGAGTGAAGAGCTATATTCCCATCTTTTCATGGCATATGTCAGAATAGGAGATTACAAGAAACAGCAGCAGGCTGCAATGAATCTATATAAGCAGTTTTCAAAGAATCCTTATTACTTTTGGGCAGTCATGAGTATTATGATGCAGGGATTAATGGCTGCTGATGAGAAGTTAGGTAAAACTATGTTCTTTCCTTTGGCTGAAAGAATGGTTATCAAGTTTATCAATGAAAACAAAGTTGATGCTGAAGCAGAGGTTCGACTTTATTTAATGATTTTAGAGAAGCTAGAGCTCTATGATAAGGCCCTGGATATACTTAGAAAAAGTAATTTAGCAGTTAAATTAATTAGTTACATGGAtgagaaagaagagaaagaagcCTGTTACCTAATGAAGCTGTGCAGATGGCATGAAGCCAACCTGACATTTAAGAAGCTGATTTTGAAGAGCCCGGATCAGTGGTCATACTATCAGTTGTACTTCACTTCAGCTTTCTCTCTCGTGAAAGAGGAATGGAAACCAGTGGATGAGTCAGAGGAGGTTCCTGATCATACTTTAGAACATATCTACAAATTCATTGCATCCCTCATTGAAAGTGAACAACCAAAGGAGAAGCGGGCCTGTAGAGGGCCATTTTTAGCACAGCTGGAACTGGGAAAGCTTTGTAAACAACAATGTATATACTCTGACTCTAGACTAAATTCCAATTCCATGGTAGATTTATTAGTAGAATATTTTAAGCGGTTTGGAGACAAATCCTGCTGTTTTTCCGACCTGTCACCTTATTTGCACTTGAACCTGGAAGAGCAGTCTGAAAAGAGAAAGTTTATTGAAGTGTTGAAATCAACTCTGCCATCTGTTGACAGTGAAGATTCAGATTCATCTCAAATTAAACTTATGCACAGGAGGCTCACAATTGagcaattttccagacattTAGGATTTCATTGTTCCCTTTCTTCTGATGAAAAGATTGCTCTTTCAAAGGAATACATGAAGCAACACAAAGATGGTTTGGTTTATGGTAAAGATCTGTTGCCTACAGAACTCCAGTACAGTGATGGGTTTGCACAGCTTGCCGTGCATCTGATGTTAGATGTAAATGATGAGAAAGGAAGCTCAGAAATGAACTGGCATCTTCTTATCATGCTGGAGAGTGCACTAAAAGCGAGTCCTTCTAATCACCATCTCAAGTTATTATTAATGAAGGTTTATTGTTCAATGGGTGCTTTTGGTCCTTGTTTAGTGGTTTTTGATGGATTGGAGATCAAACACATTGAACAAGATATTCTTGGgTACACTGTGACACAGTATGTTGAAGCTCTTGGTCACTTTGAGGCAGCTTCATCCATGTACTTAAACacattaaaattcttttatGGAAATCAGAAGAGTACACCAGAACATATCATTGCTGCATACAAGTATGGGTCATTTGAAAAGATTCCTGAATTTATTGAGCTCAAGAAGAGGCTTGATTGCTCTCTACATTTTGCCAGTGTCAATTATGAAAACATGGTATTAGATGCTTTTCTCAAGGCAAACAGTCTTGCAGATGCTCAAAGTCATTTTACTGAGAGTAACCTCCTGGACAAGTGCACTGTAGCTAAAGACTGGATGATGGATCTGAGGGACAACAGAGATCTGAGAATACTTGAGACATGGGATCTTCCAGAGAGACAGCTTACAAAGGACCAAGAGCTGAGGTGTATGGAACAAGAGGTTCTGTGGTTAAGACTCAGACTCCTTGTCCTGAGGGGCCTGGCACTATCTGTTTCCTTAGTTCCCAAGCCTCCTCAGAATATGCAAGCCATGAACAATGGTACAGCTGAACCTGTGTTCCCTTTGGAACAAGTCATCACTGAACTAACAGAGGTTTTACAGGAGATTGAAAAACATCCAGGCACAAGAGAAAAGCTTCCTCTGCTTGGTCCTCCATGTTCAAGACTAGCAAGGTTTATTGATGGACATCATGGAACGGTAATGGTTGCCATGTTAAGGGTGTGTCATGAGGCCCATCATCTTCATTATGGGGCACAAGATTCCAATGCAAAGGATCACTGGAATAACATTCAAGAAAATTTAGAGGAGGTGTCAAGAATTCTGAAAGACTCCACTGCAAAATGTTCAGCTATGCTCACAATAGGCAGTGAGGGGAAGACAATGTTCAATGGATATGTGTTGGAACCTTTGGTCCTTCTAGTAGAGagCTACTGTTGCATTGTCTTGTTAGCAGCTGTGAGCTGTAGATTTCTCCAAAAACTTGCAGGTAGcaaaaaagccaagaaaaagaaacctgtaCCTGCACAAACAaaTGAGGAAACTGGTCCATTCAAGGCATTCCTATCTACTCTGCAGTCTAACATTTCTGCTCTTCATGCATCACTTGTGGAAGTGAATGTTGCACAGTTATCTGACGATCTCTTGGAACTAAATTTAGTTGAGCTCGACAATGAGACCAAGTCTTCTATTGTGTCGGAGATTTGGGAGAAGTTACAGACCAGTTACAAGCAGTCAGTGAAGGAGATTTCAGAACTTTTACATCATAAAGTCAAATTTGCCAAATCTCTTCAAATATGAATTATGTGGATATGAAACAAGTAAATGTGTAGAATCTGGTATTATCAGAGGTATAATCCACATCCCAGCAAGTAAGGTAGTGCATCTTCTTTCAGTTGCACAAGGGTCCTAACTGGACATGCTGGTAATCGAAGTTGGCTTTATCCAGCAGACTGGAACCTTCAAAACTACAAATTGAAGATCAGACAGAGAATGTGTTTTTACAGTGGAGGCTGTTCCAAGTGGCATCTGGTCACTTGGTGTAGTTTTGATGAAGAAATAGTGTAgccctaaaaaaacaaatatgtttTGAAAGGGCAGTAAGCTTATTGTAAGGAGTAAAAAGAGCATAATAGGCTTTTTGTAATCTTCAAACTCAAAGCAGTGTTTTCGCAAATTGATCATACAGAAGACAGCCCAAACAAGCAGATTACAAAACAATCATGAAGTAGTAAGGGTATGCGAGGTGGAGGCTAACATTGTTGGTTTATTTTGGAGACATTAGTTCCTTCTCACAATCAAAACTCCACTTAGAGTCAGTTTGTAAATGTTCAGAAAACTCCATGAGTATCATGTCTCTTGTGAGACTGTAACTCAAATTAGGAAAGGCATAAAAATCACACATCTTCCATACTACATACTATCCACGTCTATCACAACAAAAAACACAATGAACACACAAATGCAGATCATGCTGCAGTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09797 all species →	NatB_MDM20	N-acetyltransferase B complex (NatB) non catalytic subunit	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019183 all species →	Family	N-alpha-acetyltransferase 25, NatB auxiliary subunit	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22767 all species →	N-TERMINAL ACETYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017196 all species →	Biological Process	N-terminal peptidyl-methionine acetylation	Interproscan
GO:0031416 all species →	Cellular Component	NatB complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17973	NAA25, MDM20; N-terminal acetyltransferase B complex non-catalytic subunit	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.