Gene detail

Detailed information of KAM7445001.1 in Porites harrisoni

Genomic Location: Scaffold0067:15708...26891
NR annotation: no NCBI-NR hit recorded
Species Porites harrisoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-g6554.t1

ACCCTGCTCGGCAATCGCGCAAAGGAGACTGGGAAGATACTCCGACTAAGCAGCCGCGCAGTCAGCGCAACGTGATCGTATTTGCAGCAATTTTCGTCTTGTTGTGTGCAGTATATTCTTGTTTTCGACTTTAACAAAGGTCTTAAAAATGAGTTCTAGATTAATAGCAGGGATTGTAGCTGGCATATGTGGCACATTTTTTCTCGGGTACTGCATCTACTTTGACAGGAAACGAAGGAGCGACCCACTGTTCAAGCAAAAATTACGCGAAAgacGGCGCAAAGCAAAGCAAGCACAACAAGAATCTTCCATGGAAGAATTAAGGAATCGAATTCCAGACAGAAATGATGCAGCTGCTGTTCAGCAGTTTTTCATGGAGGAAATTCAGATAGGAGAAGATCTTATTCATCAAGGTGAAACTGATGAAGGTATCAATCACCTAATTAATGCTGTCACAGTGTGTGGTCAACCACAACAGCTTTTGCAGCTCTTTCGTAGCACTCTTGATGATGAGCCTTTCCAAAAGCTTCTAGAAAAACTTTCCTCCATGGCCTCTAACCCTATGGTCCAGCAAGTACACCCAGCAGGATTTAGTGGGGACTCTCTGGATTAATGTTTACTTAGACATTTACagttaggcccagttcagacgtcacATTTCACATGCGCCAAATCTaataacaagaatttttctcaATTAGCATCAGAtttggcacatgtgaaatgcagTGCTTGAACCATGCCTTAGttaatattttttactgaaacaTTGTTTGCTGAAGAAGCAGAAGTGTTGCCCTGGGCAGTTAGCTCTGTTGCCTGTATTTAACCATGAACTCAGAGAAGAAATCTGTCATTAATACAGGGATGGAAAGTATGGTCCGGTTTCCTGATAACAAGTTTGAAGCAAGtctgcaacattgctgcaaaatgaATTGAACAGccaagttgcacgttttacaACCCACATTCGAACCTGTCCTGCATCAAATAAAGttgcaaggttttttttcctgggtggtaaaacgcgcagcATTGCTGTTCAACTCACTTTGCAGcaatgctgcaaaacaagtcgcatgttttttgttgcccATGTTACTGTTGACCGATATTGAAATGTCACTGCTAAGAGTATCATAGCTCACAATAAGGTTCCAATGACACTGTTTTATTGAAGTTTACTGGGTAGGAATTATCAACCAAATTTATTTCTGGTAGACAGTAAAATAAGGTATATTACATTGCTTCAAACTATACCAGTGCCTTCCAGCCCCTCAAAGGCTTTATTTGTTTGAGACAACATATATCAACTTTCATGTTTAGATATGGCTTGAACCAACAACACAACCTTTGTTTAAGCAATTTCATGTCATGTTGATGTTGATTTGCACCTTGTCAAGGTTGCTCAACTAGACATATTATCATTAGTTGGTTAGCTGGGGTAAGTCCATTTTTTGTAGAACTTACAGGTTAGAAAGAAATCACTTATAACATTTTTTAAGTAAGTTCATTGTTGTTTACACAAAGTGCCTGAGAAAGTAATTACAAAACCTGAGCTTCATGACAAACATTAAGCACTACATTATAAACAACAATGACCCTTTGAAAAACAAGCAACAATGAacttaggctgaacagttttcaaaacccCTGATTGGAATCCATTTTAATACGTTTTAATTACCTTCctttgtatttgttattttAGCCCATGGTTCGTACtatcttgaaaaggtcttgaaatGTAGTAGTTGTCTTGAAAAAGTCCTTTGAATTCGGTTAATGTTCTTGAAAAAGTatcttgatttctttattaggtctTGAAAAATCCCTGAAATTCACTACCTTGtctaaaaacatttttgaacATGAGCAATATcttagttttgtttctttatttttaatgcTGTTTCTGTACCTCAGATGCAATTGCAAGTCATACCCAGTCATTTTCCAAAGCTTTGTTGTCGAAAGTAGTGTAAAATAATGTGATCAACCATGCTGaagtaaaaattgcaaatgacaGACTCCATGACGTGTTTTAGCCAGTAAGGTGTTCAAAAGGGGGTTAAAGAAGGCCTATTTATTGAATAAATCTTAGTCCTTTAAAACTGTAATttatccttgaaaagtccttgaaatttgtttgtctgaagttGTGCGAACCATGTACAATGTTTTTGACActatttttgtttcactcagtttggtggtcaaatggccaaaatttgtTTCACATCTCCTCTTAAGACTGATTTTagaataattattgtaatcacTGAAATCTTCttatcataactataacaaaattctctaaTCTGATTGGCCATTGGCAGGCCTACATTTTTTTCATCAGTAGGTGCTATTGCTCGTATTATTtagcttttgaatttttttttttcacatctaGCGAAATACTCTCAGAAGATCTtgtgatttaattttttgttgaaaaaaagttgAGTTAAGTATCAAAATTTTGTCTTAGTTATCATTAAATAAGGTAACATTTAACACTTAATGGTCctgagggaaacagttaattttgttccCCGAGAAACTCAATGTTTCCCAAGGTAGAACTCTGGAAGCTGGAAATTCAGTAAACCTCGACGTAATGGCGGTCGCGGGTCAACATTCACTGGTTGCAGTGCAGTGTTACCCTCTGatgtcatagattttgcaatgttgcccacTCGGAGATTTtggcaggaaacagtttcattgttaatGTCATGTGACCGTGAGGTAACCGACAAGAGGGCGCGCTGTTGGGacaatttccagctatataacaataacaaaagTTCTTGTCACCCTACTCGGCCTGTAATGAAACCAATTGGATTAATTGTACCCCTTCAACACGTACGTCtgattttgtttttgattacagactgaattggactctGCTTAATGCTATTACCGTTATTGTTGTGTTATGTCTCTGATCAGTAAACCAGCAGTAAGATGATTTTAAGTTATTAGTTGTAActgaacaaaaaatatattactGATGATATGACATGGAAAATAAAGTGGACACGACCAGCTAAATAAAGCAGCCTTTCTAACTGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02064 all species →	MAS20	MAS20 protein import receptor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002056 all species →	Family	Protein import receptor MAS20	Interproscan
IPR023392 all species →	Homologous_superfamily	Mitochondrial outer membrane translocase complex, Tom20 domain superfamily	Interproscan
IPR022422 all species →	Family	Protein import receptor MAS20, metazoan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12430 all species →	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005742 all species →	Cellular Component	mitochondrial outer membrane translocase complex	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0008320 all species →	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0016031 all species →	Biological Process	tRNA import into mitochondrion	Interproscan
GO:0030150 all species →	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0030943 all species →	Molecular Function	mitochondrion targeting sequence binding	Interproscan
GO:0031307 all species →	Cellular Component	obsolete integral component of mitochondrial outer membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17770	TOM20; mitochondrial import receptor subunit TOM20	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.