Gene detail

Detailed information of KAM7450549.1 in Porites harrisoni

Genomic Location: Scaffold0011:2579713...2583099
NR annotation: no NCBI-NR hit recorded
Species Porites harrisoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04803 all species →	Cor1	Cor1/Xlr/Xmr conserved region	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006888 all species →	Domain	XLR/SYCP3/FAM9 domain	Interproscan
IPR051443 all species →	Family	X-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19368 all species →	XLR/SCP3/FAM9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000795 all species →	Cellular Component	synaptonemal complex	Interproscan
GO:0007286 all species →	Biological Process	spermatid development	Interproscan
GO:0051321 all species →	Biological Process	meiotic cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19528	SYCP3; synaptonemal complex protein 3	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.