Gene detail

Detailed information of KII61376.1 in Thelohanellus kitauei

Genomic Location: scaffold04623:304977...308713
NR annotation: no NCBI-NR hit recorded
Species Thelohanellus kitauei · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

RF11_12790

ATGCCACCACAGGATTGGGTAGTTGGCGAGTTCCTGTTTCCCGTCTTAAATCTAGTGGCTGTGGTGTTAAACTACTTCGGCTACTACCAACTGGACGTTGTTTACGCGCTCAGAGTACTAAGGATCATCAGTGTTCACTCATTTATATTCGATTACATCAAACGGATTTTGGGTAATTATGTGCGCTTTAGCGCCTCCCTTGTTCTGGCGATCGCATTTCTGATTGTGTTAACCTCCCTTTCCTTGCAGCTGTTCACTGGAATTCCAACGGCCCAGGACCCAAACACGTCAGTGCTGGAAGATTTTCCCACCTCGTTTTTAAATATCTTTATAATATTTCTACAAGGCGGTGCATTCGGGACCATGTTGGGCCTCGCTGCCGAAGTATCGGCGGCTTTGTACTTTTTTGTGGTGCTTTTTTTCGTTGGTTGTCACTTTTTTAGCAACACGATTATGATGAGTGTATTTATAACATTCATATTGGCCAACTTGGAGTTGACTGAGGACGAAATTAAGGAGATGCAGAAGGAAATCACCGTCCCTTTTGATCCTTTGGATGATTACGCGGGGTCCAGCAAGGAGACTCAAGTTGTACGACTCTCTGATGAAGTGAACGACGAGTTTGTGTTACCGTTCCGATTCAAAGTGTTTCGTTTTTTCAAAGACTCATCTCCTTCGGTGCCAATACCCATCGAGCTGCGGGACTCTGATACTCCTAGCATAAACAGGAATTTTATGTTTTTATATATGAAAGACGACTACCCTGTTTGGGATGAACGCATTTACGTGCCTAAAAACATTAGACCCGGAACCGATGTTTATAAAACACATTTTGTGACTAAAAATTTCGGCTTTAATCAAGACGACTTTAAGCCACTAAATCTGAATTTTGAGTACCCTTCGGTGGTTGAGATGATGAAAATCTTGAGCGCCAAGTCCTCGCCTCTTCATACTCCAATTACTGAAGCCAGGAAGGGTGCATTCAGGCAAATCAGAAGGGCTTCTAGTGAGTCAGCCACACAATCAAATGAAGAGAAAGAAATTGCGACTCTTCAGAAAAAAATTTCAAATTTTCTGGAAATGAGAGCTCGGCTGATTGAAACGCTTAGAGAACAGCACCCTCTGATTGATAAGTCGCTCTTTATTTTTGATAAAAACAATAAAATCCGCAAATTTTGCGGGTTGGTTCTCAATTCCCGCTACGATAACAAGGACGCTTCTTTCGTCATTGGTAACATCTTGGAGTCGCAGAGTTATTTTGAATGGGTAATGATTTTACTCACTCTTGTTTCTTCAGTGTTTATGATGCTGGAGACAGCTGAGAATATGGTCTTTGATCAGCAATACACCACCATTTTAGAATACGTGTTTGTCTGTATCGGCGTCACGGAGGTCATATTACGCATGATATCCCAAGGCCTTATTTTCACACCGAGTGCGATATTTAATGACCCCTCAGATATTCTGAATGTTTTTGTCGCGATCATTAACGTTATTCACAGCTTTTACTTTTTCCAAGTTTCTCCATCGAACAAATTCATCAACTCTACATCCTATACATATTTTGCAATTTTTTTAAGAACTGCCAGGTGTATCAGACCCTTTCGAGTAGTTCTAATTTCTAAAGATCTCTTCAGAGTCATCGTCCTCTTACTCGGTGGCTGGAAGAATATTCTCAAGGTCTTATGCCTTTTATTGATATTATTACTCTTTTTCTCCTATTTTGGCTACCTTTCGTTCAAGAACCGATTAACCCGTTGCAACGACGACCAAATCGAGTCCTTGAATCAATGCCAAGGCCAATATTTGGCCACTTTATCGGCAGTTCCTGTGACTCTCCCAACAAACTCGTCGTATGATAGTACCGCATTTCAAATTCTAGTGCCAAGAATGAATGTTTCTCATTCTAGATTTTTTTTTGATGATTTTGTGAGTGCCTACCTCTCGTCATATATTATGATGACGTTGGATTCGTGGGATTCAGGGATGGCTTATTTTAAGGCTTGTGTAGGCTCTTGGGTGACTCTCTACTTCTACGCCTATGTGTTCTTTGCTAACCTGATAGGTGTGTCTATGTTTATCGGTGTGGTGTGCCAGAGCTACAATATTAAAACCGGGGTTGCGTTACTTACAAAAGACCAAAGGAATTGGAGCGATCTTACCCAGCGTATAGACCTAACATCCCCTGAGTTCATACCAAAAAGACCTCTGGATGTTCATAAAGCCAGGTTATATGACATCATCATGTCACTTCCATACAGAATTTTTCACAGTCTGGTGAGCTGTGTCTCCCCTACTGCTCTACTGTTGTATCCTTTGAACGAAAAGAATCTGGAGGCCGAACAGTATATTTGTTATATCATAATAATGGCCTGTCATGTCTACTTTCTCATCGATTTGATGTTAAAGATAGTGGCTTTTGGGTTCATAACGTATTTTAGGAGCTTATTAAGCAAATGTGACACTCTTCTTATTGTTTTAACAATAATTGTGGCGGGGTTGAAACTTTCGAACCAGTTCACGGGTATCGTTGTTCTTCACTACATTATAATATGTTCGGTGACTATCCAACTCATTTTGCTGAGTGCCCGATGGGACGCACTCAAAAATTTGATGCTCACATTCATAATGAGTGTCGTGAAAAGTCTTACAACCATCACGGTCATGTTTATAATCATGGTGGTCTATGCACTCATGGGTAACGTCTTATTTAGTCGCGTCAAGTTCGGGCTAACTTTGAACCGTTATTTTAACTACCGGACCTCCTATAACGCATTATTTATGTTGTTTATTCTAGCCACGGGTGATAACTGGAGCGCATATTTATTTGACTCGGCCATACAGGAACCAATGTGTACATATGATCCGGATTTTCCTGTCAGATCTGACTGTGGTGGTAAAATTGCAGCCATTATATACTTTATAACCTATTTGTTAATTATCCAACAAATTGTTCTGAATCTGTTCATAGCAAACGTGCTTTCAAATTTTGCGGTCTTCTGCGCCTCTGATGAAGTTAGTGGCCGTTTCAAACCATCCGATATTTCTAGCTACATCAAACTGTGGAATAAATTCGATAAGAAACAAAAATCGAAAATTTCAAGAAATTACGCCAGAATGTTGTGCCTGGAGTATTTTTATTTGAAGGGCTACACTTCACCCGACGATTGGTTCATAATGGCCCAGTTATACGAAGAAATAGACAGATTTATCAAAGAGAGTTATATGAATCAAGATGATGTTCCAAAAGAGGAAGATTCCTTCAAAACACACGGAACGATATCTTTCAGGGAGCTCATGCTTATTCTGGCTACCAGATTGACAGACATCAAGGTTTCTTTTAAAACAAACGAACTTTTGACCCGAATGCGGTTTGAAGAAGATATTTCTGAGAATGTGTCTTCCTCTCTGATTTGGAAATGGTACAAGTACATGAAAAGTATGATGAAAAACGAAACCAAGAATCTGGATGATTCAAAAACCATTCGGTTACCAACTGAAAGGATTGATTTAAACTCTTCGCAAGAAAAGGATATGCCCAAGTGTAAATTAAAATTTGATCCGGAATCCCTCAAAAAGCAACTTGATAATATCAAAGCGGAAACACCCACCACAGACCCCGAAACCATAGATGCATTTTGTAACTGGTGGCACGATGAATATCTTGCTCTCAACACGTCCAAACAATTCTGA

Transcript

rna-gnl|WGS:JWZT|mrna.evm.model.scaffold04623.42

ATGCCACCACAGGATTGGGTAGTTGGCGAGTTCCTGTTTCCCGTCTTAAATCTAGTGGCTGTGGTGTTAAACTACTTCGGCTACTACCAACTGGACGTTGTTTACGCGCTCAGAGTACTAAGGATCATCAGTGTTCACTCATTTATATTCGATTACATCAAACGGATTTTGGGTAATTATGTGCGCTTTAGCGCCTCCCTTGTTCTGGCGATCGCATTTCTGATTGTGTTAACCTCCCTTTCCTTGCAGCTGTTCACTGGAATTCCAACGGCCCAGGACCCAAACACGTCAGTGCTGGAAGATTTTCCCACctcgtttttaaatatctttataatatttctacaAGGCGGTGCATTCGGGACCATGTTGGGCCTCGCTGCCGAAGTATCGGCGGCTTTGTACTTTTTTGTGGTGCTTTTTTTCGTTGGTTGTCACTTTTTTAGCAACACGATTATGATGAGTGTATTTATAACATTCATATTGGCCAACTTGGAGTTGACTGAGGACGAAATTAAGGAGATGCAGAAGGAAATCACCGTCCCTTTTGATCCTTTGGATGATTACGCGGGGTCCAGCAAGGAGACTCAAGTTGTACGACTCTCTGATGAAGTGAACGACGAGTTTGTGTTACCGTTCCGATTCAAAGTGTTTCGTTTTTTCAAAGACTCATCTCCTTCGGTGCCAATACCCATCGAGCTGCGGGACTCTGATACTCCTAGCATAAACaggaattttatgtttttatatatgaaagaCGACTACCCTGTTTGGGATGAACGCATTTACGTGCCTAAAAACATTAGACCCGGAACCGATGtttataaaacacattttgtGACTAAAAATTTCGGCTTTAATCAAGACGACTTTAAGCCActaaatctgaattttgagTACCCTTCGGTGGTTGAGATGATGAAAATCTTGAGCGCCAAGTCCTCGCCTCTTCATACTCCAATTACTGAAGCCAGGAAGGGTGCATTCAGGCAAATCAGAAGGGCTTCTAGTGAGTCAGCCACACAATCAAATGAAGAGAAAGAAATTGCGACtcttcagaaaaaaatttcaaattttctggAAATGAGAGCTCGGCTGATTGAAACGCTTAGAGAACAGCACCCTCTGATTGATAAGTCgctctttatttttgataaaaacaataaaatccGCAAATTTTGCGGGTTGGTTCTCAATTCCCGCTACGATAACAAGGACGCTTCTTTCGTCATTGGTAACATCTTGGAGTCGCAGAGTTATTTTGAATGGGTAATGATTTTACTCACTCTTGTTTCTTCAGTGTTTATGATGCTGGAGACAGCTGAGAATATGGTCTTTGATCAGCAATACACCACCATTTTAGAATACGTGTTTGTCTGTATCGGCGTCACGGAGGTCATATTACGCATGATATCCCAAGGCCTTATTTTCACACCGAGTGCGATATTTAATGACCCCTCAGATATTCTGAATGTTTTTGTCGCGATCATTAACGTTATTCACAGCTTTTACTTTTTCCAAGTTTCTCCATCGAACAAATTCATCAACTCTACATCCTATacatattttgcaatttttttaagaactGCCAGGTGTATCAGACCCTTTCGAGTAGTTCTAATTTCTAAAGATCTCTTCAGAGTCATCGTCCTCTTACTCGGTGGCTGGAAGAATATTCTCAAGGTCTTATGccttttattgatattattactCTTTTTCTCCTATTTTGGCTACCTTTCGTTCAAGAACCGATTAACCCGTTGCAACGACGACCAAATCGAGTCCTTGAATCAATGCCAAGGCCAATATTTGGCCACTTTATCGGCAGTTCCTGTGACTCTCCCAACAAACTCGTCGTATGATAGTACCGCATTTCAAATTCTAGTGCCAAGAATGAATGTTTCTCAttctagatttttttttgatgattttgtgAGTGCCTACCTCTCGTCATATATTATGATGACGTTGGATTCGTGGGATTCAGGGATGGCTTATTTTAAGGCTTGTGTAGGCTCTTGGGTGACTCTCTACTTCTACGCCTATGTGTTCTTTGCTAACCTGATAGGTGTGTCTATGTTTATCGGTGTGGTGTGCCAGAGCTACAATATTAAAACCGGGGTTGCGTTACTTACAAAAGACCAAAGGAATTGGAGCGATCTTACCCAGCGTATAGACCTAACATCCCCTGAGTTCATACCAAAAAGACCTCTGGATGTTCATAAAGCCAGGTTATATGACATCATCATGTCACTTCCATACAGAATTTTTCACAGTCTGGTGAGCTGTGTCTCCCCTACTGCTCTACTGTTGTATCCTTTGAACGAAAAGAATCTGGAGGCCGAACAGTATATTTGTTATATCATAATAATGGCCTGTCATGTCTACTTTCTCATCGATTTGATGTTAAAGATAGTGGCTTTTGGGTTCATAACGTATTTTAGGAGCTTATTAAGCAAATGTGACACTCTTCTTAttgttttaacaataattgTGGCGGGGTTGAAACTTTCGAACCAGTTCACGGGTATCGTTGTTCTTCACTACATTATAATATGTTCGGTGACTATCCAACTCATTTTGCTGAGTGCCCGATGGGACGCACTCAAAAATTTGATGCTCACATTCATAATGAGTGTCGTGAAAAGTCTTACAACCATCACGGTCATGTTTATAATCATGGTGGTCTATGCACTCATGGGTAACGTCTTATTTAGTCGCGTCAAGTTCGGGCTAACTTTGAACCGTTATTTTAACTACCGGACCTCCTATAACGCATtatttatgttgtttattctAGCCACGGGTGATAACTGGAGCGCATATTTATTTGACTCGGCCATACAGGAACCAATGTGTACATATGATCCGGATTTTCCTGTCAGATCTGACTGTGGTGGTAAAATTGCAGCCATTATATACTTTATAAcctatttgTTAATTATCCAACAAATTGTTCTGAATCTGTTCATAGCAAACGTGCTTTCAAATTTTGCGGTCTTCTGCGCCTCTGATGAAGTTAGTGGCCGTTTCAAACCATCCGATATTTCTAGCTACATCAAACTGTGGAATAAATTCGATAAGaaacaaaaatcgaaaatttcaagaaattacGCCAGAATGTTGTGCCTggagtatttttatttgaagggCTACACTTCACCCGACGATTGGTTCATAATGGCCCAGTTATACGAAGAAATAGACAGATTTATCAAAGAGAGTTATATGAATCAAGATGATGTTCCAAAAGAGGAAGATTCCTTCAAAACACACGGAACGATATCTTTCAGGGAGCTCATGCTTATTCTGGCTACCAGATTGACAGACATCAAGGTTTCTTTTAAAACAAACGAACTTTTGACCCGAATGCGGTTTGAAGAAGATATTTCTGAGAATGTGTCTTCCTCTCTGATTTGGAAATGGTACAAGTACATGAAAAGTATGATGAAAAACGAAACCAAGAATCTGGATGATTCAAAAACCATTCGGTTACCAACTGAAAGGATTGATTTAAACTCTTCGCAAGAAAAGGATATGCCCAagtgtaaattaaaatttgatccGGAATCCCTCAAAAAGCAACTTGATAATATCAAAGCGGAAACACCCACCACAGACCCCGAAACCATAGATGCATTTTGTAACTGGTGGCACGATGAATATCTTGCTCTCAACACGTCCAAACAATTCTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR028823 all species →	Family	Sodium leak channel NALCN	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46141 all species →	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032224 all species →	Biological Process	positive regulation of synaptic transmission, cholinergic	Interproscan
GO:0032230 all species →	Biological Process	positive regulation of synaptic transmission, GABAergic	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KII61376.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.