Gene detail

Detailed information of KXJ05727.1 in Exaiptasia diaphana

Genomic Location: LJWW01001504.1:62...7191
NR annotation: KXJ05727.1, putative E3 ubiquitin ligase complex SCF subunit sconB, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810	Domain	F-box domain	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR051075	Family	SCF complex subunit WD repeat-containing protein	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19872	UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16794	PAFAH1B1, LIS1; platelet-activating factor acetylhydrolase IB subunit alpha	-	Exosome	ko04147	deepkoala