Gene detail

Detailed information of KXJ05983.1 in Exaiptasia diaphana

Genomic Location: LJWW01001266.1:41...9676
NR annotation: KXJ05983.1, Protein PRRC2A, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ05983.1

ATGTCCGACCGCTTGGCTGCTAAAATAAAGGACAATGCAGGGAAGCCGAAGTATTCTTCACTTAACCTAAACCAGACGTACAAAGGAAACAAAGTTGAAATCAAAACCTCCACAGGAGCGACTCGCCATGGATTACAAAGTTTGGGAAAGATTGGATCCAGTCGCAGAATCCCTCCTCCGGCCAATTTACCTTCACTAAAAAGCGAGAATTCTGGAAACGACCCAACTGTAAGTTTAGTACCAAGTGGTGGTGGAGGATGGGGAAGTGCGAAGGAAAAARCGGACAGTGCAAGCCCGACGACCATATCAACACCTCCACCTTCGAACATCCAGCCTTCACAATCAAATGTAGTAGTCACACAGCAGCCATCGTTGCAACCTCAGCGGCCTACGCCGCCGTCATCGTACCCAACGCAAGTAGCAACACAACAACAGTCGCAAAACTTGGGGCCAACGCGACAAGAAACTACGACGAGTGCAAAGCAAGAAAAAAGCGAAGTACAGGCAAAAACATGGGGAAGTGTTTCACAAAGCGAGGCTGGTGGTCAAGGGAAAACCTACTCTCACCAGCCGACACCATATTTCAATCGAGAATTTCCAACCCTTGGTGGTCAAGACAATGGAGAGGCAAAGCCAGATGGAAAAGAAAACTATGGACCAGCACCAGTTATTCGCAATACTCACGAACCTCCTTGGATGGAGCGCAGTGGTCCAGGACAAGCAGGCCGACCACCACCACAACATGGCTATACTGGACAGGATCAGCATGACAGACCTACTTATCAAAGATCAGGCCAAAACTCTAAACAAGGAGCAAGACAAGACAGAAGGCAAGATCAAGATAGAGACAATAAAAAACCTGTTGTTAGACCATCTGTTCTTCGACCAGAAGACATTCAAGCCATGGACGATGAAGATGATGATGGCGGTTGGGCTGGTGCTCATGGAGAAGTAGATTACACAGCAAAATTGAACTTTGAAGATTTTGAAGAGGAAGATAAGGATTGGGCGAAGGAAAATATTGAAAGACCAAGCAAGGAACAAAACAAGGACGAGGAACAGCAATCACAAGACTCGGAAAGAGAACCAGTAGAACCAAGAGAACCTGTTATTTTAAGAAGACCTCCACAAGTCAATGACAGGCCAAAGCAACCTAAGTCTGCATGGGGTGAACTACCTCAAAGGCCTCAAGAACTCACAGATGGTAACAGACCGCCACGTCCCTTCGACAGTCAAAGACCAGGCTCAGAACAGAGAGCAGCCTGGAATATGCAGTACCCTCCTCCTAACCAAACCCAGTCGAGAGTTCCTCCTGGCCAGTACCCTCCCCTCTCTGGGTCTCCACATGCTGGGCAAGATGTTTCTCCTGGTAATAGACCACCTAATCAAGAAGGACCAGTTACAAGAAGGGACAGTGATCCACCTGATGAATGGACACTAAAACGGCAAAAGCAGCAAGAGGAAATGCATGCGGCTGTGGAGAGAGCAAGGAAGAGAAGGGAGCAAGAGGAGTTAGAGTTGCAAGCTAAAACAAAGGCAGCTGCAATGATGAGATTAAAGGCAATCGAGGAAAAGGCTAAACAGAGTGATGTCAAATCTGAGTCTGCAGAGCCATCTGATAATAAGGAAACAAAAGCTGACTTTGAAAACGAAAAAGAACAAAAAGAAAGAAAGGTGAAAGATGTTGACCATGTTGCGGCTTCTACCGAACAAAAACCTGTGGTTAATCTCAGGCCTGAAGATCATCCCCGACGACGGGCGGACAGTGATTCCAGCGACACTTCAAGATCTAGTGGATCACGACAGTTTTACCATCAACAAAGAAATATCCCACCTCGTTTCCAGCAACAAAGACAACAACAACAGCAACARTATCAACAACAGCAACTTTATCAGGCTAGTCATCAAACATCTGCCTATCCACACAGGGATTTCTATGATGCAGCAGTTCCTAGGCCTCCACAGACTGTTGATTCTGTTTCCCCTTCAGGCAAAACAAGTAGACCTGGAGATGCTGTCCCAGTCAAGAGGATTATGAAACGATCTGACAGCAGCAGCACTGCTGGTGATGATGTAGCAAGTGTCAAGTCTTTAGAGAGYGTTGGTGACAAAGAAAGGGGGTCRGGAACTTCTGTCTTTAAAGAAACAGAGGGARCCAAAMCAGATTCGGTTTCAAAGCACAAAGATTCAGAAACAGCAAGGAAAGACGGTAATGAAACCAGAAAACAGGACAATCAAAGAAAGCCAAATGATTATGARAGACCATCAGATCAAAAGCAGTTTGACAAAAGTGGCGACAACAAAGAGGATGTTAGTGTATCTTCTGGTAGTGCTAGAAAACGTGAATACAAACCAAATGACAAGAAAGTAGAAGAACMACACAAGCGAAAGAGAGACGAACATGAGGATCTTGATTGGGATGATAGGAGAGGCAAGTTGGGTCGTGAAAGGCAAACTGATAGCCGTGGAAGGTTAAGGCAAGCAACAACTGGACGTGGTAGAGGACGTGGAATTGGACGTGGTAGACAAGATTACAGAAGTGATGGTGGTGATAATCGACAAAGACATGTACGAGATTCAAGGTCAAGGGATTCTAGAGATATCAGAGAACAGAAAAAAGAGATGTCAGATAAAAATGAAAGACAGAAAGAACCAAAAGGAACGGAAGATCAGAAAAAAGACAATAAAGATAARGTTTTCACAGATGATTCTAAAGATAAAACTGATATAAAGAAAGAGGGAAGATCAGATCGAGAAAACCATGACCGTAAGACATATCACCAAGATCAGGCGGCTCAAAGAGACATGCAAGAAAAGGARAAAGGAGAAAGAAAGATGGAYAAATTTGAAAAGAGAAGTGATAGRTATGATGATAGACCTCAAAGACCAAAGAAGTTTGATTCAAGGAAAGACAGTCGTGAGAGCAGAGATGAAACTAAAAGAGACTCAGTGAATGAGAAAGATGAACCCAAGCATGAAAACTATAAAACAAACAGAGATGAGCCTCGGAAAGAAAGAGACAATAGAGAACCTGCAAGAAGAGGAAGGTTTGCATCAAGGGACATCAGAGAAGAGGAGCGCTTTAATAATCAACGAACCAATCGTGATGGTGATAGATAYCAAGATCATAACAAGCAAAACCAGGAGGGAAATAAAGAGAGAGAACTTGAAAGGTATAAAGACAAACCTCGAGAAGAACGTGATAAAAATATTAAAGATTATGATCGGTACAGAGACAAGGATTCCTTTAGAAGTAAAAGAGATTATACTGCTCGCCGTGATAGRGGTGGTCATCGTACCCARTTCTCCACAAGGGGTAGAGGGAGCCTTGGGCGTGGACTACGMAGCAGAGGAAGTGGACGGCTTGTWGGGAGTGGTCGAATTGTRGCAAGTAATTATAATCGCCCAACCAAGAAAGAGGAATTTTCTGATAATGATGATACAGATGACAGTGGTAGTGAATCTAGTAGCTACACCACAGCCACCTCAGCATCGGAAGAAAGACCTGAGGAGAAGGAAGAAAAGCCAAAAGAACAGCCAAGAAGCACAAGTCAGTCAAGTAGCTCAACACGGGGACTTAAATCGCCAAGAGGGAACAGAGGCCGTGGAGGTAACTACCTTCGTTCCAGACCACAACCWGAAAAGCCGCCAAGGTTTCAGAAACAGCAGGAAAGGGCRGCACAGCAGCGAAATTCTGGAAGAGGAGGTATGCGTGTGGATCGTAATTCAGTGCGTGGAAGCCGTGGAAGAGGTAGGGGAAGAGGGCGTGGTCATRTTGYATCCAGTTCACAAGATAATGACGAAGGGAAAGGTGATACTGTCATAGAAGCTACTRAAAACTGGGATGAAGATGTTGATTCGAGTTCCAAAGAMCAATCAAGAGATGAAAAACCATCAACACGTAAAKGTGGCTTTCCTCGCTCATCATATGAAAAAGGTTCTAACCGACGAGGATCATCTAGAGATGAGTCTGGAAAATTTTCTTCAAGACGTGAGGGAAATCAGTCTAACACACAGTCAAGAAAAGGGGATTCTTTTTTAGCCGAAAAGCAGGTAAAAGTTGAAGGTTCAAAGTCGGCCAGCGGGGAACCTAGGGGTTCTTTACCTGCTGTAAAAATGGCAGAATTAACATCAAGCAAGAAAAATAGTGGAACCCCTAAAGATGACAAGAGAACTGACTACGGTGCTGTTGACAGTATTGACGGAAAAGTGGTGCCTAAACGAAATGATACAGTTAAAAAAGCCAACATTGAACTATTTGATCTCCACAATGTTGCCGGTGTGATATGCATTGATGATATCCCAGATGATGCCTCTGATATTTCCTCAAGCGGTTTTGTGGAAGTCACCTCAAAGCGAACTCAAAAGGAACTAAAAGAAAAACAAAGAGAAGAAGATGAAAGAAGAAAACGAAATGAAGAGAAAGCAAACCAGAGAAATTCAGATTCCAAATTCAAGAAAAACCAGACTAGCAAACCGCCTCGGTTTAGCAAGCAACATCAAAGCTCAAATGCCCAATCAAAATCTTTTGATGGTAAACTCCCAGTTCCTGTTTCCTTGGAGGGTGCACCTGGATTGGTCTCTGGYAGTATTGGAAGTAACCCATCGAGTACCAACTCCACTAAGCGAAATAGTCCAATTACAGTAGACAGGCCTTTATCACCACAAGGTCCTGTATTTAATGCATGGAACAARCCCCTGACCTTAGTGACACCAGCTAAGGCACCTGGGACAACTTTGGTTATGACTTCAAATGTACCAGATCCTCTAGCTGTTGGCAGTGGAAAGCCTCCAAGACAGCCACCGCCT

Transcript

Protein

Uniprot

Uniprot term	Description
Q7TSC1	Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1
Q6MG48	Protein PRRC2A OS=Rattus norvegicus OX=10116 GN=Prrc2a PE=1 SV=1
P48634	Protein PRRC2A OS=Homo sapiens OX=9606 GN=PRRC2A PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07001	BAT2_N	BAT2 N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033184	Family	Protein PRRC2	Interproscan
IPR009738	Domain	BAT2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14038	BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030154	Biological Process	cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22909	ZC3H13; zinc finger CCCH domain-containing protein 13	-	Messenger RNA biogenesis	ko03019	deepkoala