Gene detail

Detailed information of KXJ06428.1 in Exaiptasia diaphana

Genomic Location: LJWW01000972.1:10116...20806
NR annotation: KXJ06428.1, DNA polymerase theta [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ06428.1

ATGCGACGCGTTGCTGACATTGTTGGAATACAAGAAGTCTACCTATCCCTTGCATCACGGGGTAGGATACCAACCCGTACKCCACAACAGCGGCAACAGCTAAGAGTCCATCGGCGCTTTTTTGCTGCGTTGGCTCTACAAGATTTAGTCCACGAGGTACCTTTAAATGTCGTTGCTCGCAGGTACGGGGCAACTCGAGGGATGGTACAGTCCTTGCAAAGCTCAGCCTCTACGTTTGCGGGAATGGTAAGCGTGTTCTGCCAGAAACTCGGTTGGGTCAACTTAGACCTTTTGCTGTCACAGTTCCAGAGTAGGCTGTCTTTTGGYGTCGAGAGAGAGCTGTGCGATCTTGTRAGGATCTCGGTTTTGAACGCCGCGCGTGCGCGAATGCTTTATAACGCAGGCTTTCAAACCATGGCATCGCTGGCGTCCGCTAAACCGGAAGTAATCGAGACAGTCTTGAGAAATGCTGCTCCATTTGTCAGCGAGCGAARACATCACGGAGAAACTGATTTGGAGGTGAAAYAYCGAAGCGAAGCACGAGTGATATGGGTTGCAGGAAAGAAAGGACTCAGTGAAAGGGAAGCAGCAGTTTTAATCATATCAGAAGCGAASCAACACCTTCAAGATGATGCTGCACAACTTGGTATTCAGTGGAAGGCACCGGAAGTAAATGCACCGGAAGCACGCGGACTAGAAAGAAATCCACCGGAAGTACGCGCAACGGAAGTAGCTGGAACTTCCATTGGTAACAAAGGGAATCGATCATTAGGAGTGGCAGGGAATCTATCTCGTGATAAACCATCCAAAAAGAAGCGGAAATTCTCAAATAGACGAAGGTTGTCGGGGGCTAATGGGAATCGGATATCGCCTCCTTTGCGGCGAAGTCCACGACGATCACCAGATACTAATCCCCCTGAAGTCAAAGAGAAATACACCAAATTGACTGACGTTAGGACTTTGCCTTCATGCCTGGAAGGACAAACAAACCGTGTTAAAGACGATAAGACAGCACAAAGCATCCGATGTCTCGAAAGCTTACCAGGAACAAGTAAAGATAAATGCACAAAAACTATGAATACCAATGGAAATACCTTGTCTTCGTGTGTAGAAGGGCAGAGGAACGTTAACGCGGCGCTCAACGTCAATCCAGTAGAATCAGAACCAGTAACTAGAAAAAGGCGAGAAACACACGAGAAAAGCAAAGTACAAAGCGATAAAACTCTCTATAATATTCAAATCGAGAATGTTATTCCGTCCAAACAGACGTCCACCAATCATAGCAGTGCTCACAAAGAAGAGAGAACTATTGCGTATGACAAACAAAACTGGAATAAAGATGCTAAGACCTTTGCTGCACGTGACTCCACGATAACCAATCATAGCAAAGATCGTCTTGAAAGTAACCAATCAGAAAGAATAGGTTTATCCGAAGAGCAAAACCGTAAAAAGGAGGCTGTAAAATATAGTTCACGTGACCTGCCTTCCACCAATAAGGTCAAAGACAAACTACAAAGCAACCAATCAGAGGGAAGGTCAGTTCCATCTATAGTTAGAAACCAGAGTCWAGGTGATCARCAACATAGACCGAATTGCTTTAACAAAGAAGTACAAGAACAACATCAAAATGAAATAAAACCAAGAGCAGATTTTTTTACGCCAATTGGGGAAACTTCCAAACAGAGGAGAACATCTCCACGGAATAAATGTAATAGCGAAACTTCTGATAATCGATTAAGTATTAAACGACGTTCTCCACGAAATGAGCTCCGCAAAGACTCGCCGAAGGAAAAGGTCCCAAGAATTGAAACAAAGATGGCGGACGAGATCGAGAAACAAGACTCCCTTCTGAACACAACACAATCATTTTCAGTGCAAGAGGAGTCGTACTCTTCTGCAGTTCTGTTTGACAACTCCGTGGATATCTCTGAGAATAAAGTGGCTCCTGGACCGAGTATATCACCAGAACTATACTCTGAGCCTTTGGACGAAGAAAAAGATGCTAAAGGGATAAAATCAGTCTTGGAATACAAGGGAAAGCGGAAAGGAATGAAGTTTTGCTTCGATTCTGCAACACATTATAAGGCACTGGCCCAAAGCTGTGGCATAACGCTAAGCGGTGATGTTGAAGATCCTAAAGTTGCTGCATGGTTGTTGGATCCATCGGCCAAGGAGAAGAGCTTGCATCATTTAGCAGCGGAGTTTATCAGTGACAAAACAGACTTGTTAGAAGGTACTGAATAA

Transcript

Protein

Uniprot

Uniprot term	Description
O75417	DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2
Q8CGS6	DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2
O18475	DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21099	POLQ_helical	DNA_pol_Q helicase like region helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR002298	Family	DNA polymerase A	Interproscan
IPR048960	Domain	POLQ-like, helical domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10133	DNA POLYMERASE I	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006261	Biological Process	DNA-templated DNA replication	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0097681	Biological Process	double-strand break repair via alternative nonhomologous end joining	Interproscan