Gene detail

Detailed information of KXJ09959.1 in Exaiptasia diaphana

Genomic Location: LJWW01000443.1:106826...112687
NR annotation: KXJ09959.1, DNA repair endonuclease XPF [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ09959.1

ATGGACGAGCTCGAGCTTTCCAATGACAGCAGTGATGTAGATCTTTCTGCTGAAGAAATTTTTGATAGAGTCATTCAGCACTCAAAGCTAACTGCTTTGAACACAAGGCAGAATAACTTGGGTCAAGAACAGTGTGGTAACTCGGAGTCTCCTGAAAGTAATCTAACCACAGGTACTGGAGGTAATCACGTGACCGTGCACTTGAGAGAAATCCCTGAGGTTCTTATTAACTGCGGTGCTGAAAAATTAGATGGATGTTCTGTTCATAGTCTATCGCTTCCGAGCCTTACGAACACTCGTGAAAGTGGATCGAATACTGCGAAAGGGATCCATGGAAGAGGCGAGCAAGCAGTGGTGAATAGAGTGCAGAGTGACGTTGTTTTACCCWTGTTTCGTGATGTCCCGCTCAAAGATTATGTCGAAGAGTGGATGAATAGTGRAAATAATAATGAATATTATTGGAACAATGCGCAAATTGAAGGTGACAGAGCTAACGAATTACATACTCAAACAGATCAATCAGAAAGGCCTCCTACAAGTCCCAAAGCAATATCAAGTACTGAATCAGACTTCGCTGGACATTCACATTTTTTCGAAAATAGTGAATACTCTTGGAGCAATGAAGAAATCGAAGATGAAAAAGACCACGCATCAAGTCAATCTGCAAAGACGCCTCCCAGTTACAAAATACAGTCTAACACTGTAGCTGACTTCGAAGAAAATCCAGATATTTTAGCTAAGTCTTCGCCATGTTCTTCTCTGTTGTCCGATTATGACGAAGAGAGTGCTGAAGTGGCGGAAATCATGGCTGAGCAACAAGATACAGCTAGAGACCAAGGGAGTCGTCTTCAATCTCGCTTAGCAGCTGTTCAAGTCAAAAAGAAATATAAAATGATTCAAAAGAGAAAGCGTCGCCCAGTTAACTTGCCAACAAACTATCTTGATATGCCGTCAACGTCGAGGGAAGCTCCCGAACCCCGTGAAACAGCCTTTGCTATTGTAAACCATATGGGCACGTCCAGTCAAGTTAACAAAAAAATCGYTCAAAATCCTCCTAGAAAAACCTATCGTAACATGGAGAATCAGGCYTGCGAAAGTTACCAAACTAATATAACAAGAGCTRCATCATTTGATCTTTGCGAGCCGTCTTCGTCTGGAAAGCGCAAAGCAAAATCCCAAGACATTTTAATTGATGATCTGAGTGACATTTCTGATGATGAACTTCCACCTCCGACTCCACCACCACTGCCTGACCGACAAGTGCTGTTCCGACGCCCCAAGCGACACAACGATGATTTATTTATCAGAAAACTCACTCCTTGCGACGAGCTGAGGTTTTTGGCCCGTGATGTACATCTCAAGTGGATCAGCCTTGCTCGAGCCAAGCAAAAACTAAAGRAYATCTTCAGTCGAGMTGACAGGCAGGGCTGGAATGAAGTTAACGCTGAGTATACTCATTCAGCCTTGATGAAAACTTGTGCTGAAGATTCSGCTTTGCAGGTCGTTTATGYCATGGCCAAGGAGGACGATGATGAAGCAAGAAGTAAAGTAGAAAAGAGAGTATTTRATGCTGGCTGTTCGATAGCTACTCAAACTAACGTGARGGAAGATGAACTAGTGGAAATTTATCTGACGCAGTATGATTGCGTAACATTTTACTCGTTTCTGGAGTCTTTAAGGGCAAGTCAGCGTGACGTCACACGTCAATCACTATGGATGTTTATGGACGCTGCTGATTCATTGTTCGTGCACGCAAAAGAAAGAGTTTATGGTTCAAGGCAGTCACAGAAATCAAAACGACAGAAAASAGACACCGTAGAGAATTTAAACAAGAAGAAAGATGCTCAAGAAGATTACAAAATGGAGGAAAGTCCTAAATGGAAATTATTAGCCGACATTTTAGAGGAAATAGAAAAAGACGAAGAGAAAAACAGGCAATTGGGTCCAGGTCACATCCTTGTAGCCGCGTATGACGGAAGAACCTGTTATCAGCTTAAAGAGTACTTGTGCCACGGATCAGAGGTGCTCTTGACTAGAATACTTAACAAAATGACCAACGACTCAGGGAATACTGGACCAGACCCTGTAATACCAGTTGATCTTGATTTCGAGATGGAAACAGATCAAACAGAAGATCCGGGAACTTCTGCTCAACCTGTAAAACAGAACGTGCCTAAATCCCGTCGAGGTAGAAGTCGGGCAGGGAGAGGGAAAGGAAAGACTGACCTAAAGCAAACCAAACTTGTCGAAGCTGATAAGGAATCAACAAAGTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR10150	DNA REPAIR ENDONUCLEASE XPF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000014	Molecular Function	single-stranded DNA endodeoxyribonuclease activity	Interproscan
GO:0000110	Cellular Component	nucleotide-excision repair factor 1 complex	Interproscan
GO:0000712	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006296	Biological Process	obsolete nucleotide-excision repair, DNA incision, 5'-to lesion	Interproscan
GO:1901255	Biological Process	nucleotide-excision repair involved in interstrand cross-link repair	Interproscan