Gene detail

Detailed information of KXJ10193.1 in Exaiptasia diaphana

Genomic Location: LJWW01000428.1:77352...87086
NR annotation: KXJ10193.1, E3 ubiquitin-protein ligase TRIM33 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ10193.1

ATGGTTTTAGAGGCTTTACCTGCCTGTTCGTCGTCTCCTTGTCGAAATGGTGGAACATGTAGACTTGCTGGGTGTAACGATGATTACACATGTGACTGTGCAGAGGATTATCATGGCGAATACTGTGAAAAGTGCATTGGTTTAGATGGTTCAACCAGCGCACGACCTGGACATTCATGCAAGTACATCAATAAGTATGGAAAAGCCAAAGGGGATGGAGACTACTGGATTGACCCGACACGATCTGGAAAACCATTCCTGGTATCKTGTGATATGACAACAGATGGAGATCGAAAGTTAAGTGGTCACGTGATAGAATCCCATGACGTAGCTAGTCCCCTGGATTGCGCGGGAAAATGTTTAGAGACTAGTGGATGTAAGTCGTACAATTACCAAGAAACTGGTTCTCCTCATCACGTGTGCCAACTGAAYAACCAATCAAAATCAAGTGCGTCTTCATCTGATTACGTCATCCAAGAAGGATTCTCGTATTATGATGCTGAACAACACGTTTTAGAGGCTTTTCCTGCCTGTTTGTCGTCTCCTTGTCGAAATGGTGGAACGTGTAGACTTGCTGGGTGTAACGATGATTTCACATGTGACTGTACAGAGGATTTCTCTGGTGAATACTGTAAAAAATGGATTGGTTCAGATGGTTCAACCAGCGCACGACCTGGACATTCTTGCTTCTACATCAATAAGTATGGAAAAGCCAAAGGGGATGGAGATTACTGGATTGACCCGACAAGATCTGGAAAACCATTCCTGGTATCTTGTGATATGACAACAGATGGAGGGGGTTGGACTATTGTACACAACTGTACATTGAAAACATCAAGTCCATCAGGGGTCAAAGAGGAAGTGCCAGACTACAGATTAATGAAAGACTTAACTTTATATAAAACAATAAATACCAACATACTTCAAAGTCTGCGCAGTGACATGGGATTTAATCAGATGCGAATCTTTTGCCACAAGAAGGCTGTGAATAGGACAGTTCATTTGATGACCAGAAGGAATGAACTTGGTCACGACGTCATCAGATACTTTACGACGCGGAACGCAGACACTCCCGCCACTGCTTRCAATTCGTACATCACAATGCCTGATGATACATCTATCCTTTCTAAGGATTGCAATAAGTTGGGCTACACAACAAGCAAAGGAAGCTATCTTAATCAATGGGGAAAAATGGATTCACACAAAGGCAAACATCGTCTTTATAACAGAATTCTAAACCACTCCCCTAGTGGCCGCACTGTTAGTTTTTATGTCGTCCCAACAATGGCTTCCGTTCAAAGTTTCATCGAGAGTTTCGAAGCACTGTTAACTTGTTCTGTTTGTAAGAAAACCTTAAATGGGCCTAAAACTCTGCCAGGTTGCCTTCATACTTTCTGCTTTAAGTGCATCGAAGGTTTGAACGAGACGTACCATACAGATGAGGGGTCACTGAAATGCCCAGTTTGCAAAACAGCAGTCGACTGCGAAGAAGGCGACATCTCGCGGCTTCCTTCTTTAACTACTTACAACTCACTGCTTCGCTTATTGGAGCCCATGAAAAAGACGGCTGGCGAAGTACAACAGCAGCAGCATCCTCCACAGTGTACAAATTGTTCCAAGCGCAGTGCATTGGCTGGATTTTGTCTTCAATGCGAAGGAATGATTTGTGGTGATTGCATAAATTACCACAAAACGCTCAAGATATTTAAAAGAGGCCATCAGGCAACGGTGTTCAAGGATTTCAATCAAGAGATCTTTGATAGCTACATCACTAACCGAGTATTTTGTAAAGAAACACTCCATGAGAAAAATCGCCTTGAGTTTTACTGCAAAACGTGCAAGAAGTGCATCTGCTACTTGTGCAAAGCACAATCAACACACAGCAGTCATAACAAGGTCAGCATTGAGGAAGCAGCAAAAGATGCTAAAAGTCTTATCAGCCAAGAAAAGGAGCGACTCAACGAGCTGCTTATCAAATATCAGAGACAATTAGAATTGTCCGATGAAAAGACGAGAAGAATTCAAAGCCAAGTTGATGCAGCAAAGGCAAAAGTCCGTAATCGTACACAAGCTATGATAGCAACTTTACAAAACCACCAAGACGACATGATGGCTACTTTGGACAAAATCTTTGCAGAGCAAACATCAAATGACGACTAG

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan