Gene detail

Detailed information of KXJ12250.1 in Exaiptasia diaphana

Genomic Location: LJWW01000329.1:193567...198124
NR annotation: XP_020904159.1, carnitine O-palmitoyltransferase 2, mitochondrial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ12250.1

ATGGCTTTATGCAAGCTTTTAGGAAGTACTGAGAGAAGTGGACTTAGTTATTTACGTTATTCAAAAAAGGCTTTTATTCGGCCAAATCAAGTGAGCTCCTCAATTTTTATAAGAAGTCAAAGCACACATTCAAGTGATGATAATTATCTCATCCCTAAGAGTAAAGTTTACACATATCATTACCAAGACAGTCTACCAAGACTACCAATACCAAAACTAGAAGACACGTGCCGACGATATCTTGATTCACAAAAACCTCTTTTGACTCCAGAAGAATATGAAGTCACTAAAAAATACACAGRGAAATTCAAAACTCAAGAAGGACCAGGTCTACATGCTGAGCTCATCAAAGTTGATAAAATGAACAAGCATACTAGTTACATATCAGAGTCCTGGTTTGATATGTATCTAAGAGACAGATCACCTTTAGTATTAAACTATAACCCTTTCATTGTCTTCAAAGATGATCCTCAAAATAATAATCAAATTGTACGTGCTACCAACTTTATTAAATCTGCTTTAAGATTCAAGAAGTCAATGGACGAGACAGTTCTTGAGCCTGATGTTTTTCATTTGAACCCAAAGAAGAGTGACAGTGATTGGTTCAAAAATATGATAAGATTAGTACCTAGAAGTCTGTCATGGTATGGTGCCTTTCTTGTCAAGGCTTTTCCTCTTGATATGAGTCAATATGGGCGACTGTTCTGCTCGACTAGAATTCCTAGTAAGAGTAAAGATAAACTGGCTACTTTTGAGGGTGCAAGACATATGCTGGTCATGCATAAAGGACATTTTTACGTCTTTGATGTCATGACTACTGATGGTAACATAGTGGATTCTGGTACTATCTATCAAAACCTTAAAGAGATCATAAACGATCCCACCCCTCCCCCGGAATACCCAATTGGTATACTAACAAGTGAAGAACGTGACACTTGGGCAGGACTTCGTCACGCAATCTCTGCTATTCCAGCCAATCATGAGTCATTAAAACTGATTGACAGTGCATTGTTTGCGCTATGCTTGGATGACAGTTCGCCTAGTGATCCCATTGAACTAACCAAGGTTATGTTACACGGAGATGGATCAAATAGATGGTTCGACAAATCATTCTCTCTCATCATCAGTAAACAAGGTACGTCTGCCATTAACTTTGAGCACGCATGGGGAGACGGCGTCGCTGTGCTTCGTTTCTTTAACGAAGTCTTCAAAGACACCACAACTAGACCAGCCGTCACKGTTGAGACAGCAAAATCTGTAAATGCTGAAAGCACAGTTAGGAAATTAGAATTTTCATTGACGTCTGAAATTGAGAGGGGTATACGGCTGGCACAGGAAAAGTTTGATAATGCTGTTGGGAAACTARATACAGAAGTGATGGAAATCACTAGCTTCGGCAAGGATTTTATCAAGACAAAGAAGCTGAGTCCAGATGCACTTTTACAGCTTGCTTTCCAGATGGGGATTTATCGCCAAAAGGGTCATTTCGTGCCCACCTACGAGTCTTGCAGTACAGCTGCATTTAGACATGGTCGTACTGAGACGATTCGACCGGCAAGCAATGCTACAGTCGCGTGTAGCGAGGCTTTTGACAGATCGCACCGTGCTGGAGTCGATGAGATGGTTCACAGGATAAAAGAGGCTTCTGATTGGCACTCTAAACTAACAAAGGAGGCAGCTATGGGCCAAGGGTTTGATCGTCATTTGTTCGCTCTACGAAAGCTCGCAGAGTCGTCAGGAGCRAACCCTGAGATCTTCCAAGACCCGGCGTACAYCCGCATTAACCGCATATACCTATCAACAAGCACACTATCCAGCCCTGCTATACTACTAGGGGGATTTGCAAATATCAATACTGAAGGCTTGGGTACTGGTTATGCTATCTTTGATGACAGACTAGGGGCTAATGTGACCTGTTTCGAAGGTGGGGCTAATGCYAGAGAGTTCTTGGACTGTGTGCAATCAAGTCTAGAGGACATGTATGCAGTTCTGAATGGTAGAAATTTCAAGAATTAA

Transcript

Protein

Uniprot

Uniprot term	Description
P52825	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Mus musculus OX=10090 GN=Cpt2 PE=1 SV=2
P18886	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1
P23786	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Homo sapiens OX=9606 GN=CPT2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00755	Carn_acyltransf	Choline/Carnitine o-acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039551	Domain	Choline/carnitine acyltransferase domain	Interproscan
IPR000542	Family	Acyltransferase ChoActase/COT/CPT	Interproscan
IPR042231	Homologous_superfamily	Choline/Carnitine o-acyltransferase, domain 2	Interproscan
IPR042572	Homologous_superfamily	Carnitine o-acyltransferase, N-terminal	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22589	CARNITINE O-ACYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004095	Molecular Function	carnitine O-palmitoyltransferase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08766	CPT2; carnitine O-palmitoyltransferase 2	EC:2.3.1.21	Diabetic cardiomyopathy	ko05415	deepkoala