Detailed information of KXJ14355.1 in Exaiptasia diaphana

Genomic Location: LJWW01000255.1:53762...78166
NR annotation: KXJ14355.1, DNA ligase 3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49916DNA ligase 3 OS=Homo sapiens OX=9606 GN=LIG3 PE=1 SV=2
P97386DNA ligase 3 OS=Mus musculus OX=10090 GN=Lig3 PE=1 SV=2
Q67480DNA ligase OS=Fowlpox virus (strain NVSL) OX=928301 GN=LIG PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF16759LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan
PF00645zf-PARPPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger regionDomainInterproscan
PF04675DNA_ligase_A_NDNA ligase N terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001510DomainZinc finger, PARP-typeInterproscan
IPR016059Conserved_siteDNA ligase, ATP-dependent, conserved siteInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR000977FamilyDNA ligase, ATP-dependentInterproscan
IPR031916DomainDNA ligase 3, BRCT domainInterproscan
IPR036957Homologous_superfamilyZinc finger, PARP-type superfamilyInterproscan
IPR012308DomainDNA ligase, ATP-dependent, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003909Molecular FunctionDNA ligase activityInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006288Biological Processbase-excision repair, DNA ligationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0070421Cellular ComponentDNA ligase III-XRCC1 complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0071897Biological ProcessDNA biosynthetic processInterproscan

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