Gene detail

Detailed information of KXJ15630.1 in Exaiptasia diaphana

Genomic Location: LJWW01000217.1:177007...204753
NR annotation: XP_020898285.1, E3 ubiquitin-protein ligase PDZRN3 isoform X1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ15630.1

ATGGAAAATTCTGATTCTTGTGATCAATCAGTGCAGGTCGTCGTTTGCGACAGAGGCTGTGGACTGCCTCTTTTGTTTCAAGATTCTTCTGGACACGATTGTACTCAAGCTTTACAAACTAATATCGCTTCACTTCAAGTCAAAATTACTAAACTAGAACATGAAAAGGAGCAAATTTCTGAGCGACTAGTTGAAAAGGAAGAGACTCTACAAGAGCGTATTCTAAATCTGGAAAACGAACTCMATAGCTACCAAATTCAAGCGTTGAATTTTGAAAGACAATTAAGGGAGTATCGTTCACAAGTTGGGTTTTATCAAAAACATTTAGAAATTCGTGGTGAGCAGCCTGTAGAATCAATGCAAGTTGAGGTATTATTAGAACGTATCGATGGCTCGCTTGGGTTCAATATTATGGGATCAAATGAGGTCGGAAGCAAGTCGGTCGGGGGCAGTGGTATTGTGGTTTCGAAAATTGCTGAAGGGGGCCCTGCAGCAAAGGCAGGAGGGCTGAGGGTACATGACAGAATAATGAAGGTTAATGATATCGATCTCTCTGAAGCGACACACTCCCAAGCTGTGCAAGCTTTCAAGGAGGCCACAGAGCCAATAAATATAGTCATACAAAGAAAAGTTGACAGGGCTATTGAATATTTGAACACCGTGGTTTCAAGCGGAACGCAAACTGAAAGCCTGTCGCACGACGTGGACACAGATAGCGGCATACACGATCGATATAGTCCTCGACAAGATCTTTTACAGTTACAAAGATCAAAATCCCTTGACGATGGAACAAGCAGTTCCGAGTGYTCGCATAAAAGAATGGACTCAAGCCGCGATGACCTAGAGCTACCGAACTTCAGGGGAGGTGCATTCCCTTTTTCAAGTGATATAACTAGCAACTCAATCAAGAATCAAGATGATTCGGTCCATCAGGTCTCATTTCTTGTTCAGGATGCCAACATGACAGATGACAATCCAAATTACATATTTAATTCAATAGCAATAACAGATCAAGTTTTCTTTGATGAAGAATTGGATTATGAATACGAGGAGGTAACTCTTTGGCTTGGTTCAGGAGACGTGGATTTGGGACTTACATTTTGTTGTGGTGAAGAAGACGAATCGGCTGTTTACATATGTGTGATTGAGCAAGATTCAGTCGCCTACCTCGATGGTAGACTTATGCTTTGGGATCAGGTTTTAAAGATTGATGATCAACCGGTTACACATATCAATGATATCGAGCCACTTGTTTGTGAATCTTCGGAAACAATCAAATTTTTGGTTGCGAGGCCAGCTCAGGAGGTCCAGGCAACGTTCATTGGTGCAGAAGGTAACGGAAATTGGGAATGTACAGASAGTTATAGTGGATTTAGAATTGCAGCGATTAAAGAGGAGGATGAGGACGGCGCAGAAACTGTCAATAGTGAAAAAACTACTGGGGACAAGTGTGAAAAAGACAGTGGATTCGGAAGAACTGATGAAAGTACAAAGAATGACGAAAGTTCGGAACATGATACTCTAGAAAAATTAAAGCGTTCAAAAGACAGAAGTAATCGTAAAGGGGGTCTTGACTCCCCTGGAGAAACCCCGCCCCATACACCCAAGAAGGAGAGCAAGTCATCTCGTTCTAGGAATTTGGACAGTGTATCTAGTAGTAAAGATAGTAGTAGTAGTAAAAACGTTGATAGAGAATCAAATAAGCGTTCACCTGAGAGAACTGACAAGTATATTACAGAAAAAGAGTCGAATAAACGCTCTCCTGATAGAAATGATAAAAAACGATCAAACGGGTCTCCGACGCATAAAGAAAAACACCGATCAGATCGTAAAAGAAAAGACGAAYTTTCTAAAGATCGAGGAGGGAACAACGAACGAGATCGTGAAAAAGAACGTGATAAAACCCGYGATCGCGATCGTGATAAAGGAAAGCATTCCGAYCATCGTCGATCGCGTCGTCTTGGWTGTGTGGATAGAAGTATTCGTGCATCGTACATGCGAGCGTGCAATAGCTCCATGCAACAAATAGATTTGTTTGGAATCGATGATCCAGTGAACACAAGAAGTGATCAAAGACGGAGGAAATCCTCCAAGGAAGATTCCAGCAATGAGSCTGGCACGCAGCAGAATGAATGGAAGGTTAGAATGACTAAAGATGGTAAACATATCTTTGTTCGGAAACAAACTAGCACAACAGCTAGACAGGCACGRAATAAGTTACTACGCGACCGGGCGCAGAAAATTACGGAAGAGCGCCGGGGTTTAACAACGGAGGATGAGACTCAGTCAGTCTATCAGGGGCGGTACTGCCCTAGAGACATGAGRAGACGGCAGCTTGAAAAAGTYCGASAAGCTCGTATTCAAAGACATCAAAAGCAAAAGGGCTCTGATAGCCCCCACACTGCGGGCAGTGGTTCAGAGAGCGGTACAGGTCGMCGRGATMTCATAGTGGAACTTAGCAAACGAAGAATGCTTAGGAATAACGAACGTAGTTTTGATGACTTTGTKACCGTACAAGAACTACTAGTGCAAAGAAATATTGGTGGRTGCCAAAGTGGTCCGATTCACGTTACCACAGTATAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q9UPQ7	E3 ubiquitin-protein ligase PDZRN3 OS=Homo sapiens OX=9606 GN=PDZRN3 PE=1 SV=2
Q69ZS0	E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3 PE=1 SV=3
P68907	E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus OX=10116 GN=Pdzrn3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051971	Family	E3 ubiquitin-protein ligase PDZ domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15545	PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan