Gene detail

Detailed information of KXJ16158.1 in Exaiptasia diaphana

Genomic Location: LJWW01000204.1:164876...175019
NR annotation: XP_020897372.1, uncharacterized protein LOC110236214 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ16158.1

ATGGATTCCCAACAACAAGATCTTGACAACCAGAGTGTAGCACGTGTAGACTTACCAACGATGAACAACAACAAGCAAAGTAATGAAGACATTGATGGATGGAACCCCATGGAAGATGACTATACTAACAAAGCGTTCAATGCCTACAAGGAACCAACAACAGCTGAACTAAGACAATGGATGCTTCAAAAGGGKGAGAAAGCTCCMAGTGAAAACATGATGGCAAACTATAGAAGCCCAGAAGGAGATGTGAGACTTTTTGTCAATGGTATTCCACCAGATTTGACTCAGGAGGGAATCAGAGGCTTGTTTAACCAAGCAGGAAAAGTAACATATTGTAAAGTCATCCCAAAAAGAGATACTAGTAGAAAAGATACATTTGGATTTGTTGGTTACCAGTCATACAGAGAGGCCGAGAAAGCTATCAGACTCTTTGATGGTTTTTCTCTTGGAGAAAACTTGAGGTTGAAAGTTAACCTTGCAAAACGAAAAGCAGAAAACATACCTTATGCTGAGAGTTCTTTGCCAGCAGGATTGACTGAAGTGAATGGAATTGATGAAAGTGCAGACTGGGATACCCAAGCAATGAACTCTGCTGAGACAGATAGTGGTGTTACTAAGATAGACACTGCTGAAGTTGCTAATACTGAAAATACGATCAATGAAGTTCCAATGGAGGAAAAACCTACTGTAAAGCAGGATAATGAACCACCAGAACAGAATCATGATAACCATACACATGTACAAGCTGCTGAAACTAGAATAAGTTCCAGTGATTATTCAACACCTGTCACTCAGTCCASTTCTGTACCAAGTAGTGCTGCCCCTCAAGTTAATGGTCAGAAAGTCTTAGAGAAGGAACTCATTCCTGAAGCACCATGTTCAGTGTGTGGAAAGAATGGACGAAGGCGTTGCTCCAGTTGCAAAATCCAGTATTGTAGTAAAGATTGYCAGATAACTGACTGGCCAGAGCATAAGAAAGTTTGTACCTGGAAAAGCCAAAAGGAAATTGAAGTCAAGCAAACCAATAAAGATGAACCATACGTAATAGATGAAGATGAGATGGAAATTTCAGATCCTCGGGGCTTCATGTCACACTTTGGTGTTCGTGTCAGACCAGATGTGGTGCCGGCAATAGCGCCAAATGCATTTGAACAAGACAACAGTTTATACCTTGAACTTGACTCWGAGTATCCACAGTATCCAGTAAATGGACTTCGTCAGCCGCTGGAGAGAGCTCAGATTACAGAGATAGAMGAACCAGAAGAAAACAATCCAGTTGTTGAAAATCGAAGATCTCMATTAATTGAAGAGATTGATCCTCCAAATACCAACACCAGGTCACCTCTGATTGAAGAGATTTCCTCAAATGATGTCCATGCAACAATAAACCACACAACTTCTCCTTTAATTAGCGAGCTAAGWTCACAGCAACAGGAACCATTGGAGCCAGAACAACCATTGATTACAGAGATCTCTTCAACGTCAGAAACTGTAAAGARTCCTGTYARTCGCCCATTGGTTGAAGAAATAGTTACATTTAATGGTACCAACAACCTGAAATCTAAGCTAACATTAATTGCTGAGAATACCAATGATGAATCTGGAACAACTACCATCACAGAAATTCCTGCCACTCAAGCCACAGAAAATCGACCACCACTAATTACAGAAATTATTCCAGGGGAATCCATTTCTCAGGCACCACAAAGTATTCAGCCGATTAACCAGAATTATCAAGAAGAAGAGTCCAGCAATGTGATATTAAACCAAAGTCCAGTCCMCCATCGCTATCGATTTGCCGACATACCACACGAGACATTGTACCCGGATAACCTTTATGACATTGTTGTCACGTCTGTCTCATCTCCAGGCCTATTCTGGGCACAAATGTTTGCAAGAGATACATTAGAAAGACAAACCTTCCTTTACCAAACCCTCAACGAAGTCTATGCCAATTCAGAGTACGAGAACTATGTTCCAATGCCTGGAGATGTGTGTGTTGCCCAGTATTCCTTAGATGACAACTGGTATAGATGTAAAGTCAACTTTATCAGTAATAATGGTTATGTTAATGTAACTCACATTGACTTTGGCAGTTCRGAAGACGTCAATGTAACCAGGATTAGGAGAATTACCAGTGACATTGCAGCCGTCAGAATACAAGCAATCAAGTGCTCTCTGTACTTTGCAGATGGTTCGCCAAAAGAGTGGAGCCATGAAATGATTGAAACTTTTCGCGCCACTGTTCTGGATGTCAAGTGCAGAGTAAACTGTGTTGAAGTCAAAGATTCTGTGTGCTTTGTGGAGTTATATGGTGCTAACGATAAAATGAGTGACATGCTTCAAGAAATGAAGAATAAATTTGTCTTAAATCCTGTGGCGTTACCAGAACAACCAATGGACAATCTTCCTTCTGAGCCCGTACCCCGTGTGATGTTAGCGTCCCCAGTATCGACAGACACTAAGACCACACCAACCATGTCACGTAATCAACCAGTTCCTGCCACGATAGCAGACCAGCCATCTATACCGCCAGATCCTATGACCACACCAACCATGTCACGTAATCAACCAGTTCCTGCCACGATACCAGACCAGCCATCTATACCACCAGATCCTATGACCACACCCAGTGTGTCACATGATCAACCATTGGTTACAAACAATGCAACCATTCCAGAACAATCATCCAAGCCCATTGCTATGACTGCACCAAGTACACTGCCTGGTCAATCAGGTGAGGCAACTACAACAAGCATTACAGCTGATCAGGTATCACAGATTTCATCGTCAGAAAGAGCGACCACACCCGTTGAGTTATCGAAAATGGTTTCAGATATTTCAATGACCTCTTTGCCAACACCAACGAGTGAAACATCTCAGCGAGAGACCCATGATTCAACACCACACAGTACACTCTCTGGACAAGTACCATGTCCAACAAGCCCTGTCCATGATGCACTTCCTGGTCTGAAAACACCACCACCATTGCCTACACTATCTACGCCAGATACTGACCGACAAGGTCAACCAACCTCTAGTTTATCAAGTAGTGATAAATTTTCAAGCACGTTGTCAAGTTCAAGCTCAGAAGTAGACTTGAAGCGAACTCTCTCGCCATCATCCYCGAGGCACGGCAACTTTACACCGAAACAAAAGTTCGAAGCAGTGGTGAGCTCCGTTGTGTCGCCAATTGAGTTCAAGGCTGTACTGWCGGAACCAGAACTCTTAGCAAAGTTAGATGAATTACACACTAAACTACAGGAGTACTGCAATTCCACGCCTTGTGATCCATCGATAATGTACAAGTACCACGACGTATGTGCTGTAAGATCAGCCAAAGACATGGAATGGCATCGTGCGAGGATCACGTTTTCTYCCCAGAACAACAGTTACTCAGTTCATTTATTGGACATGGACACCAAAGAGAGAGTATCAACTGACAACATGAGACCCGTTCCAGATTGGGYCCAAGCTCTTCCTCCTCGCTGTATTATRTGTTCTTTAGGTGGCATAACCAAGCGTTCTGGGATGACAAACTTTGGTAAAGATGCAAGTGAGAAGTTTGCGTCACTTGTTTTGAACAAGAAATTCACCTGTAAAGAGATTAGCAGAAAGAAGAACTCTTACTTGATTGACTTGCTCGATGAATTGGGCCAGCCGTCTGTCGCTAGAGAATTGATTGATGGCGGTTTTGCAGATGCATTTGTAAGGAAACCATTTGAAAACATGGAGCTGAACGCGTCCTTCTTATCATGTCGTATGGCCATTAGTTCAGCCAGGTTACCACCGCCTGGAGAACTTTTCCAAGCCAATGTCTCTCAATATGAATCACCTGGYCACTTCTTTATTCAGTTGAAAGATGAAGAATCACAACAAACACTGGATAAAATATGCCAAGAAATGAATGGTCACTACGCCRCTTTACCTCCTCCTACCGACTGGCAGGCCAGAGAAGGTCAACATTGCGCCGCGTTCTTCAGGAGTTCTTGGCTAAGAGCTTCTGTGAAAAGTATCAACGAAGACAAAGTTGCAACTATTTTTTGTGTCGACTTTGGGAATGTTGAAATCGTTCCTCATTCAGCTCTTCGGCCATTGGAACCTCAGTTCTCATCACTTCCCCACTGCGCTCTTCACTGCAGTCTTGCATACATTTCACCACCCGAAGGCAACACYGAATGGACTAAAGAAGCTGTTGAATTTGCACGGATGAAAATGCCGCTTTCATCCACTGTGAATGTGTCTCTTGCTTTTAAAGGCAAAACCATTCTGTTCATCGATGTATTTCTGCAAAATAATGACAGTCTGTCGCGTCTGTTGATCTCAAAATCGCTTGCTTCAAAAAGAAACCAYCAAGGTTCCCCTGCTAAAGAAGAAAGGTTCTTCAATCAACATGACAGCAAAGGTCAATTTCTTCAGAAGTCACCAAGACAAAGAAACCGAGACAAACAGCCTACTCCTAAAGAAATGGCGATAAGTGCTGCMAAACTTCCTCAATCGAAGGAGTGCTTCAAAGTTTTTGTGACACACATTACATCCCCGGGYTGTTTCGCTGTTCAAGTTGCAGATTTTGAATTGGCGTCCAAGGTGGCTGCCCTTCACAACCAGATGAATTCACACTACAATACCAACACTTATCCACCCCACCARCCTACTTTGAATGAGGTCTGTGCATCGCAGTTTACCGTAGATAACTCATGGTACAGAGCGTGGATCGAAAAAGTAGTCGATGATAAAGTCCATGTCTATTACGTGGATTACGGAAATTCAGAGGTGCTGGACGCATCGCGGCTACGTCCTCTAGAACCACAGTTTAGGGGTCTCCCTTATGCTGCTATAACGTGCGGTCTTGGCAGTATTACTTCACAAGGCGAGTGGAGCCCAGAAGCGAAAGAGTTTTTCAGTTCCAAGGTACCGGTATTTGCAGCTCTAGAGGTCAAGATTGTGTTTAAGAAATATGAATGCATCTTCTTGGAGATTTCTGATCCTCAAGACCCGACGACAACCGTCAACAAGACCTTGGTAGCGAATAACCTTGCTGTGTGGATGTTCGACAAGAAGCCACGCCGTGAATTCTCATCCAGTAGTCCTCCCGGTGCGATGCCAATTGATGTAAGAGAAAAGAAACTTAAAATTGATGAAAACACGATGAAAAGCTTAGAAAACGATCTCAGTATGAAGAAAAACATTGTGAATGACAGTGAGATGCCAAGACAARACATCGAAAACCCAAGACAGACCTTTGAAGATACCGGAAGAAACAACGCCGAAAATCAAGTAAAACTCATTGAAAATCAAGAACGCCCCAAGGAGAATCCAGGAAGAACAATGGAAACTCCACAAAGTTTCGTCCAGGCTCCACTCAAGTTTACCGTTGATTCAGTGCCAATTATAGCAGTACMACATGGAGATCTCCACAACAGTATGGTGTGTGATGTGAAGCCAACAGGAATCGTTTCTTTTCAGATGTTAACCAAGGAAATAGAARACTTTGCATCACTTGGTACCAACATCAGCGTCCACTGCAACCAAGTAGATAACACGCCGTATTACCCCTCTGTTCGTGAGCTGTGTTTTGTGCGTTTTACTGAAGATAAAGAATGGTATCGTGCTGTGGTTGATGCTGCTCTTCCCAGCAACAAGTTTAAAGTCACTTTTGTTGACTATGGYAACGAAGATATCGTAACCCCTGAAGCTATTCGTGTGATGAATGAGAAGTTCCTCGCGCTCCCTCGACAAGCCTACACCGGACCACTAAAGGGAATAGCATCGACCAATCAGACGCCATTGCCTGATGACGTAATCAACGCGCTTAAACAACAGCTATTAGACAAGCGTTCATTTGTTCTTGTGGATAGGGACGGCGTTGAACTTTTTGATGTTGGTCCAAACGGTGATCCAAGCAAAAGCGTCAACGCAAAGTTCATTGATATTCTCTATCCTCAAGTTCCAACAGAGGTCGACACCGAGTTCGCAGMTTTGGTAACCGAAGTTCRCAACACCYGTGAAATATGGCTACAACAACAACACCAACATGACGTCATTAAAACCTTGATGGATGACGTCAATTTGTATTGCAGTAATACGTCATCAATGACGTCACCACCTTCTCAAGGAGACCTTTTATTCGCYAAACACAGTTTCTATAATRGMTGGTATCGRGCAAKRRTCGATGAATGGAAACCACCCATGGCTAGTGTTCGTTTCGTYGACTATGGATACAGCGAACAAGTGACCGCAGACAAGCTACGTCCACCAAGATCTGATCTACTGAGGCTTCCACCCCAGGCTGTTAAGTGTTATTTGGTTCGTGTGGTACAAGGGAACCCTGGSGCAGATGACTTCATCAAGCAGATCTTGAACAGAGAGTTTATCGTGAAGATAGTCGAGAAGAAAGGAGATAGTTTAGGRATTGAGTTAGAGGACTATGGTGTCCCTAATGGACCTTTGAACATCAATGATTACTTGATTGGATTTGGCTACGAGGCGTAG

Transcript

Protein

KXJ16158.1

MDSQQQDLDNQSVARVDLPTMNNNKQSNEDIDGWNPMEDDYTNKAFNAYKEPTTAELRQWMLQKGEKAPSENMMANYRSPEGDVRLFVNGIPPDLTQEGIRGLFNQAGKVTYCKVIPKRDTSRKDTFGFVGYQSYREAEKAIRLFDGFSLGENLRLKVNLAKRKAENIPYAESSLPAGLTEVNGIDESADWDTQAMNSAETDSGVTKIDTAEVANTENTINEVPMEEKPTVKQDNEPPEQNHDNHTHVQAAETRISSSDYSTPVTQSXSVPSSAAPQVNGQKVLEKELIPEAPCSVCGKNGRRRCSSCKIQYCSKDCQITDWPEHKKVCTWKSQKEIEVKQTNKDEPYVIDEDEMEISDPRGFMSHFGVRVRPDVVPAIAPNAFEQDNSLYLELDSEYPQYPVNGLRQPLERAQITEIXEPEENNPVVENRRSXLIEEIDPPNTNTRSPLIEEISSNDVHATINHTTSPLISELXSQQQEPLEPEQPLITEISSTSETVKXPVXRPLVEEIVTFNGTNNLKSKLTLIAENTNDESGTTTITEIPATQATENRPPLITEIIPGESISQAPQSIQPINQNYQEEESSNVILNQSPVXHRYRFADIPHETLYPDNLYDIVVTSVSSPGLFWAQMFARDTLERQTFLYQTLNEVYANSEYENYVPMPGDVCVAQYSLDDNWYRCKVNFISNNGYVNVTHIDFGSSEDVNVTRIRRITSDIAAVRIQAIKCSLYFADGSPKEWSHEMIETFRATVLDVKCRVNCVEVKDSVCFVELYGANDKMSDMLQEMKNKFVLNPVALPEQPMDNLPSEPVPRVMLASPVSTDTKTTPTMSRNQPVPATIADQPSIPPDPMTTPTMSRNQPVPATIPDQPSIPPDPMTTPSVSHDQPLVTNNATIPEQSSKPIAMTAPSTLPGQSGEATTTSITADQVSQISSSERATTPVELSKMVSDISMTSLPTPTSETSQRETHDSTPHSTLSGQVPCPTSPVHDALPGLKTPPPLPTLSTPDTDRQGQPTSSLSSSDKFSSTLSSSSSEVDLKRTLSPSSXRHGNFTPKQKFEAVVSSVVSPIEFKAVLXEPELLAKLDELHTKLQEYCNSTPCDPSIMYKYHDVCAVRSAKDMEWHRARITFSXQNNSYSVHLLDMDTKERVSTDNMRPVPDWXQALPPRCIXCSLGGITKRSGMTNFGKDASEKFASLVLNKKFTCKEISRKKNSYLIDLLDELGQPSVARELIDGGFADAFVRKPFENMELNASFLSCRMAISSARLPPPGELFQANVSQYESPGHFFIQLKDEESQQTLDKICQEMNGHYAXLPPPTDWQAREGQHCAAFFRSSWLRASVKSINEDKVATIFCVDFGNVEIVPHSALRPLEPQFSSLPHCALHCSLAYISPPEGNTEWTKEAVEFARMKMPLSSTVNVSLAFKGKTILFIDVFLQNNDSLSRLLISKSLASKRNHQGSPAKEERFFNQHDSKGQFLQKSPRQRNRDKQPTPKEMAISAAKLPQSKECFKVFVTHITSPGCFAVQVADFELASKVAALHNQMNSHYNTNTYPPHQPTLNEVCASQFTVDNSWYRAWIEKVVDDKVHVYYVDYGNSEVLDASRLRPLEPQFRGLPYAAITCGLGSITSQGEWSPEAKEFFSSKVPVFAALEVKIVFKKYECIFLEISDPQDPTTTVNKTLVANNLAVWMFDKKPRREFSSSSPPGAMPIDVREKKLKIDENTMKSLENDLSMKKNIVNDSEMPRQBIENPRQTFEDTGRNNAENQVKLIENQERPKENPGRTMETPQSFVQAPLKFTVDSVPIIAVXHGDLHNSMVCDVKPTGIVSFQMLTKEIEBFASLGTNISVHCNQVDNTPYYPSVRELCFVRFTEDKEWYRAVVDAALPSNKFKVTFVDYGNEDIVTPEAIRVMNEKFLALPRQAYTGPLKGIASTNQTPLPDDVINALKQQLLDKRSFVLVDRDGVELFDVGPNGDPSKSVNAKFIDILYPQVPTEVDTEFAXLVTEVXNTXEIWLQQQHQHDVIKTLMDDVNLYCSNTSSMTSPPSQGDLLFAKHSFYNXWYRAXXDEWKPPMASVRFVDYGYSEQVTADKLRPPRSDLLRLPPQAVKCYLVRVVQGNPGADDFIKQILNREFIVKIVEKKGDSLGIELEDYGVPNGPLNINDYLIGFGYEA

Uniprot

Uniprot term	Description
F1R237	Tudor domain-containing 6 OS=Danio rerio OX=7955 GN=tdrd6 PE=1 SV=2
O60522	Tudor domain-containing protein 6 OS=Homo sapiens OX=9606 GN=TDRD6 PE=1 SV=2
Q58EK5	Tudor domain-containing protein 1 OS=Danio rerio OX=7955 GN=tdrd1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan
PF01753	zf-MYND	MYND finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002999	Domain	Tudor domain	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR002893	Domain	Zinc finger, MYND-type	Interproscan
IPR050621	Family	Tudor domain-containing	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18405	TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7	-	Chromosome and associated proteins	ko03036	deepkoala