Gene detail

Detailed information of KXJ16468.1 in Exaiptasia diaphana

Genomic Location: LJWW01000196.1:43576...56519
NR annotation: KXJ16468.1, Follicle-stimulating hormone receptor [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

KXJ16468.1

ATGTTCAAGGACTTAAAGTATCTACGCTCTCTTAACCTGGACCATAATGACATTTTAACTATTGATAAAGGTGCCTTCACAACTCTACATAGTTTAGAATCCTTAAATATATGCTGCAATGAAATATCAGCTATTGAAGCRGAGTCCTTTCCAGGTTCCCTGAAAACCTTAGATCTTCAAGACAACGTACTGGAGTCAGTTCCTACCAAGGCACTAAAGAATCTCAAAAGACTACAAAATTTGAATCTTGATGCTAATCTAATAGAGTGCATCCATAACAATGCATTTGAAGGACTACAAAGTCTGTCAGAACTCTCAATCAAATGGGACAAGGTAAACCACGTTGAACACCAGGCCTTTTATGGACTACCTCGACTTAGACAACTAACGTTGGTCAACGTGACTCTCAAAAGGTTTCCTAATCTTACTGGGACAACTTCACTCCAATTTCTGACGCTGGACTGTAATGAAATAAAAGCATTTCCACCGGATTTCTGTGAAAAATTTCCAAAGCTACGGAAACTGAGCGCTGAAATGAACAGAATCACAGCATTGCCTGATATGTCCAAGTGTTCGTCGCTTGAATCAATTAACCTCGATCACAATCACATCACCTCCATTGATTTACAAGGCRCGAACAACCTTGAAAAGATCTCTCTAAAAAACAACCGAATCAAGTATATCTCAAAGAACGCATTCAAAGGAAACACCAAGCTAACCAGTCTCATCATTGCGCAAAATCATATCCAAGATATTGCCGAAGAAGCATTTCAACCTTTGAAATCACTGCTTCTATTAGATTTGGGTGCAAATTCTATCAAAGAACTCGATGGTGAAACATTTGAAGGACTAAAAAGCCTGACACAGTTGACTTTACGACGAAATAATTTAACGTCAATTCCAACTAAAGCTTTGAAGCATCTTTGGAAATTACAAAACCTAGACTTAGGGGCAAATCCCATCAAGGAGGTTCACGATTATGCTTTTGAAGGTTTGACAAGTCTTCAGGAATTCTCTATCAGTTGGGAAAAAGTTGAAAAAGTTGATCACAGAGCATTCAAAAAACTTCCCTCGTTAAAACAACTGTCTTTGGTGAATGTCAATCTCAAGCGCTTTCCAGATTTAACAGAAACTAACGCTCTTCAAGACTTGATTCTGGAATCTAATTTCATCACATCATTGCCTAAGGATTTCTGCCAAATGTTTCCCAAACTCTACAACTTTAACGCAAACATGAACAGAATTACAAGTATTCCTGATATGTCTAACTGTACCTCGATGGTTTTATTACACTTGGTTTTCAATCGAATTACATCAATTGGTACATCGTTACAGGGAATGTCTACACTAAAAGATATAACTCTTAARCAAAACGCCATTACAGAGATACCAAGCGGTGCATTCACTGGAAATAAAAGACTTGAGAACTTGAACCTGGCTCACAACAAAATAGAGAAAATTGCTGATGATGCTTTTGTACCTTTGGAATCTCTCACTACTTTAGACYTAAGCTACAACGACTTTGTCAAGTTGCCTACAAAAGGGATGCAGCGTGTACGCGAGCTAAAACTCCGAGGCAACAAAAGATTGAATGAAATATCCGCTGAGAGCCTTCCAAGCGTTCGCTGGGTTGAAGCAAGCTATCCTTACCACTGCTGTCAATTTCGCAAAAAGGTTCACGAGGTCGCATTGGCTCCTGTGGATAAGACGACTTCAGTAACAAATAAAGGATGGACTTGGCAGAACTTTGAGGGAATGAACTTYCTYATTGARGGGTCTGGAAACGAAACTATGACACTTGACGAAGATGACGAACTTTCTGGATTCGGCTCAGCTCCAATCGATCCCGCAATTGCTCACGACAGAGAGGAGCCTGAGACTGAGARAACTACACGACAACCTTCAAATTTACCGTCGGGAACTGATGCTGAACTTCTCAGTGGTTCTTGGAACCCTCCTCCACTGGCTCCATTTGATGTGAACTGCACCCCCCTTCCTGACCCTTTTTTTCCCTGTGAAGACCTTATGGGGTCGTGGTGGCTCAGGGTAGGAGTGTGGTTTGTGTTCATGTTAGCGCTACTTGGCAACGCTGTGGTTGTCATCGTGATTGTGCTTTCCAAGACAAAAGTTGACGTATCCAAGTTCTTGATTATTAATTTAGCCRTGGCTGACCTCTGTATGGGGATATATCTCGGTTGTCTGGCCATTGTCGACGCTTCAACTATTGGTAACTTCATGCATCATGGTGTTGACTGGCAGCAGAGTTCAGGGTGTAAAACSGCTGGATTTCTAGCAGTGCTATCCAGTGAAGGTTCAGTCTTCACATTAGCTGTCATTACTATCGAGCGTTACATCGCCATAAGACATGCACTACACGTGGAAAGAAAAATGAGYCTGCGTCAAGCTGCCATCGTGATGGCCAGCGGTTGGTTTCTTGCTTTTATCATTGCTACATTGCCAYTACTCAAAGTCAGTGACTACACCAAATTTAGCATYTGTTTACCTTTTGAGACTGGGGACGAGCAGTCCCTCGCTTTTGTAACATTATTGCTAAGTTTGAACTTTATCGCATTTGTTGTGATATTCGGCTGCTATGTACGAATATATTTTGAGATCCGTGGATCAAATGCGTGGAACACTAGTGATACTCAAGTAGCACTACGTATGGCTTTGCTAGTTGTGACTGACTTCGTGTGTTGGGCTCCAATCGTCATCATCGCTTTGCCAGCAGCGTTCGGGTCAACGTTCGTTAGCCTGGAGCAAGCTAAGGTCTTCACTGTGTTTGTTTTTCCTCTCAATTCATGTGCAAATCCGTTCCTTTATGCAATCTTCACGTATCAGTTTAAAAAAGACTGCTTGAATATATGCAGACAAGTTCAAAATTCGCCGGTACCTCCAATYATACAAATATCTTTAACGAAAAAACGTTTATCAATGAGTGGAATTCCAGCGGAATTACGTCAAGGGTCTCGTGCTAGTGTTGTTTATACTCCGGAGACACACAGTGATGGAAGAATGACWCTAAGAGTGCCTTCTTTTAAGTTAAGTAGAAGGTACTCGTTACCAGCTGCTTTTAAACTAGCGGCCAGCAGTCAACGAGGCAGTGTAAAAAGCTCTGGGGCCGAGTATTCAGACAATAATGAAAATTCAAAATGTTCAAATGAAAACACCACGGAACAGACGACTTTAACTCAAGAAAAAACAAGACAATCAAACATAAACAAGGCGCCAGGTTGTTCTAAGGACGAGAAGAATGATAATTCTTCAAACAAAAGTACAGAAGAGCAGAAACAAGATGCAACCGCAGAGAAGCCGCCACTAATTGACAGAAGAACTGCTGTGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q27987	Thyrotropin receptor OS=Bos taurus OX=9913 GN=TSHR PE=2 SV=1
P16473	Thyrotropin receptor OS=Homo sapiens OX=9606 GN=TSHR PE=1 SV=3
Q8SPP9	Thyrotropin receptor OS=Sus scrofa OX=9823 GN=TSHR PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR002131	Family	Glycoprotein hormone receptor family	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016500	Molecular Function	protein-hormone receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755	Biological Process	hormone-mediated signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08399	LGR6; leucine-rich repeat-containing G protein-coupled receptor 6	-	G protein-coupled receptors	ko04030	deepkoala